Sequence 1: | NP_477317.1 | Gene: | RhoGEF2 / 36915 | FlyBaseID: | FBgn0023172 | Length: | 2559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006522994.1 | Gene: | Itsn1 / 16443 | MGIID: | 1338069 | Length: | 1743 | Species: | Mus musculus |
Alignment Length: | 1980 | Identity: | 359/1980 - (18%) |
---|---|---|---|
Similarity: | 628/1980 - (31%) | Gaps: | 672/1980 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 58 PGATSAGPSAG----APQSPVIVVDSVP--ELPAPKQKSVKNSKSKQKQKQLANKSKIPRSPSLA 116
Fly 117 SSLSSLA-SSLSGHRDRDKDRDKDRENQNAVPPQTPPLP------------PSYKQ----NQMNG 164
Fly 165 DSTAAAGGGV-SAP-----ATPTTAN-------NNNASHNNGSIMGGGVQLNQSDNSNPVLQAPG 216
Fly 217 ERSSLNLTPLSRDLSGGHTQE---------STTPATTPSTPSLALPKNFQYLTLTVRKDSNGYGM 272
Fly 273 KVSGDNPVFVESVKPGGAAEIAGLVAGDMILRVNGHEVRLEKHPTVVGLIKASTTVELAV----K 333
Fly 334 RSQKLTRPSSVSVVTPSTPIL----SGRDRTASI-TGPQPVDSIKRREMETYKIQTLQKMLEQEK 393
Fly 394 LNLERLKSDQNNPSYKLSEANIRKLREQ-------------LHQVGAEDAPTVKLQA-------- 437
Fly 438 --AAGNKNTALLTPNQIQHLSASATHSNQQFHHLHHHHNLHNNNYPPQQQPASTSPAFLS-LLPR 499
Fly 500 S--LSSLSLGTRKNKTEKDLTTSSPFGLTTDFLQQQRMSHQ---AESMSQSMHQHTSTPTSQ--- 556
Fly 557 -QFFHPHQQQHRFKETGPTSKGKNKFLISRSLIEEDVPPPLPQRNPPRQ-LNLDLKNGNASPGGS 619
Fly 620 HLVAPVSDLDRATSPQLNRSQQQQLPSSTDNSPSNAKSKRSKIKTKALSD---PKM---STQMFL 678
Fly 679 QMESASAAGAAGGSIEVDGGPPPLPPRLPGMMTEDMSRGSCQNLAQPNSVGTAFN---YPLVSTT 740
Fly 741 TAVQNDNLNIAFPLSQRPNIVQQLQQYQQQQQ---HQMSGGQATGALGQTPNLGKNKHRRVGSSP 802
Fly 803 DNMHPRHPDRITKTTSG---SWEIVEKDG----ESSPPGTPP-------PPYLSSSHMTVLEDPN 853
Fly 854 ENNRGAAAAGPGVFIES-------HQFTP-MAGASSPIPISLHSSHMHAAQSNDTQKEIISMEDE 910
Fly 911 NSDLDEPFIDENGPFNNLTRLLEAENVTFLAIFLNYVISNSDPAPLLFYLITELYKEGTSKDMRK 975
Fly 976 WAYEIHSTFLVPRAPLSWYRQDESLAREVDNVLQLEYDKVEILRTVFLRSRKRAKDLISEQLREF 1040
Fly 1041 QQKRTAGLGTIYGPTDDKLAEAKTDKLREQIIDKYLMPNLHALIEDENGSPPEDVRKVALCSALS 1105
Fly 1106 TVIYRIFNTRPPPSSIVERVHHFVSRDKSFKSRIMGKNRKMNVRGHPLVLRQYYEVTHCNHCQTI 1170
Fly 1171 IWGVSPQGYHCTDCKLNIHRQCSKVVDESCPGPLPQAKRLAHNDKISKFMGKIRPRTSDVIGNEK 1235
Fly 1236 RSRQDEELDVELTPDRGQASIVRQPSDRRPDANISIRSNGNTSCNTSGLNTTDLQSSFHGSCAND 1300
Fly 1301 SINPGGGAGCNMDLSTSVASTTPSTSGSVAAGLSAFAELNALDTVDKEARRERYSQHPKHKSAPV 1365
Fly 1366 SVNRSESYKERLSNKRNRNSRRKTSDP------SLSSRPNDEQLDLGLSNATYVGSSNSSLSSAG 1424
Fly 1425 GSESPSTSMEHFAAPGAAGGVQV--------PPMGLNQNQHPHLLIQQHAQQYCQQDSFQAGLAG 1481
Fly 1482 AAGSSAASNSSFWNAGHPLPVARWTLESEDEDDVNEADWSSMVAAEVLAALTDAEKKRQEIINEI 1546
Fly 1547 YQTERNHVRTLKLLDRLFFLPLYESGLLSQDHLLLLFPPALLSLREIHGAFEQSLKQRRIE---- 1607
Fly 1608 -HNHVVNTIGDLLADMFDGQSGVVLCEFAAQFCARQQIALEALKEKRNKDEMLQKLLKKSESHKA 1671
Fly 1672 CRRLELKDLLPTVLQRLTKYPLLFENLYKVTVRLLPENTTEAEAIQRAVESSKRILVEVNQAVKT 1736
Fly 1737 AEDAHKLQNIQRKLDRSSYDKE-EFKKLD--LTQHHLIHDGNLTIKKNPSVQLHGLLFENMIVL- 1797
Fly 1798 -LTKQ-----DDKYY-------LKNLHTPLSIT------------NKPVSPIMSIDADTLIRQEA 1837
Fly 1838 ADKNSFFLIKMKTSQMLELRAPSSSECKTW 1867 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF2 | NP_477317.1 | PDZ | 260..334 | CDD:214570 | 11/77 (14%) |
RGS_GEF_like | 934..1055 | CDD:188710 | 21/120 (18%) | ||
C1_1 | 1151..1202 | CDD:278556 | 5/50 (10%) | ||
RhoGEF | 1539..1731 | CDD:238091 | 47/196 (24%) | ||
PH_RhoGEF | 1770..1875 | CDD:275411 | 26/124 (21%) | ||
DUF2413 | 2242..>2378 | CDD:287302 | |||
Itsn1 | XP_006522994.1 | EH | 39..132 | CDD:197477 | 1/1 (100%) |
PLN02983 | <155..226 | CDD:215533 | 19/109 (17%) | ||
EH | 238..333 | CDD:197477 | 20/103 (19%) | ||
PTZ00121 | <355..739 | CDD:173412 | 80/435 (18%) | ||
SH3 | 766..825 | CDD:388381 | 15/70 (21%) | ||
INTAP | 825..939 | CDD:374674 | 30/120 (25%) | ||
SH3_Intersectin1_2 | 939..990 | CDD:212922 | 17/135 (13%) | ||
SH3_Intersectin1_3 | 1028..1079 | CDD:212924 | 13/161 (8%) | ||
SH3_Intersectin1_4 | 1096..1160 | CDD:212926 | 13/65 (20%) | ||
SH3_Intersectin1_5 | 1180..1233 | CDD:212928 | 7/70 (10%) | ||
RhoGEF | 1260..1443 | CDD:238091 | 47/196 (24%) | ||
PH_13 | 1462..1615 | CDD:374702 | 28/147 (19%) | ||
C2_Intersectin | 1604..1738 | CDD:176021 | 1/4 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5422 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |