Sequence 1: | NP_477317.1 | Gene: | RhoGEF2 / 36915 | FlyBaseID: | FBgn0023172 | Length: | 2559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_032027.2 | Gene: | Fgd1 / 14163 | MGIID: | 104566 | Length: | 960 | Species: | Mus musculus |
Alignment Length: | 940 | Identity: | 179/940 - (19%) |
---|---|---|---|
Similarity: | 303/940 - (32%) | Gaps: | 318/940 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 1425 GSESPSTSMEH---FAAPGAAGGVQVPPMGLNQNQHPHLLIQQHAQQYCQQDSFQAGLAGAAGSS 1486
Fly 1487 AASNSSFWNAGHP--------------LPVA------------RWTLESEDEDDVNEADWSSMV- 1524
Fly 1525 --AAEVLAALTDAEKKRQEIINEIYQTERNHVRTLKLLDRLFFLPLYESGLLSQDHLLLLFPPAL 1587
Fly 1588 LSLREIHGAF----------EQSL---KQRRIEHNHVVNTIGDLLADMFDGQSGVVLCEFAAQFC 1639
Fly 1640 ARQQIALEALKEKRNKDEMLQKLLKKSESHKACRRLELKDLLPTVLQRLTKYPLLFEN-LYKVTV 1703
Fly 1704 RLLPENTTEAEAIQRAVESSKRILVEVNQAVKTAEDAHKLQNIQRKL----DRSSYDKEEFKKLD 1764
Fly 1765 LTQHHLIHDGNLTIKKNPSVQLHGLLFENMIVLLTKQDDKYYLKNLHTPLSITNKPVSPIMSIDA 1829
Fly 1830 DTLIRQEAADKN--SFFLIKMKTSQMLELRAPSSSECKTWFKHFSDVAARQSKNRSKNASSNHDT 1892
Fly 1893 SISDPALAAIPHSNTKESLELSTDTVQPLAATATLTTTPLAPMLPIATVTPAPATNNSNVSSLTG 1957
Fly 1958 VQLRNPQRDATASESDADYVNTPKPRSSQNEVNRTMSIRSTGEPIQKYSANGTEANDVTLR--HS 2020
Fly 2021 QSTRESVRPGSTGEERNSTYGMVGGNSKRDSASIVCSNNSNNTRTLLMQSPLVDPTAIQVSISPA 2085
Fly 2086 HTAEPVLTPGEKLRRLDASIRNDLLEKQ-------KIICDIFRLPVEHYDQIVDIAMMPEAPK-- 2141
Fly 2142 --------DSADIALAAYDQIQTLTKMLNEYMHVTPEQEVSAVSTAVCGHCHEKEKLRKKVAPSS 2198
Fly 2199 SFSSSPPPL-PPPNRQHAQAQAQIPPSRL----MPKLQTLDLDEVAI---HEDDDGYCEIDELRL 2255
Fly 2256 PAIPSKPHERPTTPLAPFNT---EPKTSQS 2282 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF2 | NP_477317.1 | PDZ | 260..334 | CDD:214570 | |
RGS_GEF_like | 934..1055 | CDD:188710 | |||
C1_1 | 1151..1202 | CDD:278556 | |||
RhoGEF | 1539..1731 | CDD:238091 | 45/205 (22%) | ||
PH_RhoGEF | 1770..1875 | CDD:275411 | 21/106 (20%) | ||
DUF2413 | 2242..>2378 | CDD:287302 | 11/44 (25%) | ||
Fgd1 | NP_032027.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..210 | ||
SH3-binding. /evidence=ECO:0000255 | 171..187 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 226..355 | 23/126 (18%) | |||
RhoGEF | 375..558 | CDD:238091 | 45/203 (22%) | ||
PH1_FGD1 | 590..697 | CDD:275392 | 26/153 (17%) | ||
PH | 590..687 | CDD:278594 | 23/143 (16%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 701..725 | 4/28 (14%) | |||
FYVE_FGD1_2_4 | 724..788 | CDD:277280 | 21/140 (15%) | ||
PH2_FGD1-4 | 814..919 | CDD:270056 | 25/152 (16%) | ||
PH | 822..920 | CDD:278594 | 25/145 (17%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 922..960 | 11/41 (27%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5422 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |