Sequence 1: | NP_477317.1 | Gene: | RhoGEF2 / 36915 | FlyBaseID: | FBgn0023172 | Length: | 2559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038964580.1 | Gene: | Arhgef5 / 140898 | RGDID: | 620718 | Length: | 1589 | Species: | Rattus norvegicus |
Alignment Length: | 2069 | Identity: | 387/2069 - (18%) |
---|---|---|---|
Similarity: | 646/2069 - (31%) | Gaps: | 714/2069 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 139 DRENQNAVP------PQTPPLPPSYKQNQ------MNGDSTAAAGGGVSAPATPTTAN------- 184
Fly 185 -NNNASHNNGSIMGGGVQLNQSDNSNPVLQAPGERSSLNLTPLSRDLSGGHTQES--TTPATTPS 246
Fly 247 TPSLALPKNFQYLTLTVRKDSNGYGMKVSGDNPVF--VESVKPGGAAEIAGLVAGDMILR----- 304
Fly 305 -------------------------VNGHEVRLEKHPTV------VGLIKASTTVELAV---KRS 335
Fly 336 QKLTRPSSVSVVTP--STPILSG------------RDRTASITGPQPVDSIKR------REMETY 380
Fly 381 KIQTL---QKMLEQEKLNLERLKSDQNNPSYKLSEANIRKL-----REQLHQVGAEDA--PTVKL 435
Fly 436 QAAAGNKNTALLTPNQIQHLSASATHSNQQFHHLHHHHNLHNNNYPPQQQPASTSPAFLSLLPRS 500
Fly 501 LSSLSLGTRKNKTEKDLTTSSPFGLTTDFLQQQRMSHQAESMSQSMHQHTSTPTSQQFFHPHQ-- 563
Fly 564 -------QQHRFKETGPTSKGKNKFLISRSL-IEEDVPPPLPQRNPPRQLNLDLKNGNASPGGSH 620
Fly 621 LVAPVSDLDRATSPQLNRSQQQQLPSSTDNSPSNAKSKRSKIKTKALSDPKMSTQMFLQMESASA 685
Fly 686 AGAAGGSIEVDGGPPPLPPRLPGMMTEDMSRGSCQNLAQPNSVGTAFNYPLVSTTTAVQNDNLNI 750
Fly 751 AFPLSQRPNIVQQLQQYQQQQQHQMSGGQATGALGQTPNLGKNKHRRVGSSPDNMHPRHPDRITK 815
Fly 816 TTSGSWEIVEKDGESSPPGTPPPPYLSSSHMTVLEDPNENNRG--------AAAAGPGVFIESHQ 872
Fly 873 FTPMAGASSPIPISLHSSHMHAAQS---------------NDTQKEIISMEDENSDLDEP----- 917
Fly 918 -----FIDENGPFNNLTRLLEAENVTFLAIFLNYVISNSDPAPLLFYLITELYKEGTSKDMRKWA 977
Fly 978 YEIHSTFLVPRAPLSWYRQDESLAREVDNVLQLEYDKVEILRTVFLRSRKRAKDLISEQLREFQQ 1042
Fly 1043 KRTAGLGTIYG----PTDDKLAEAKTDKLREQIIDKYLMPN-LHALIEDENGSPPEDVRKVALCS 1102
Fly 1103 ALSTVIYRIFNTRPPPSSIVERVHHFVSRDKSFKSRIMGKNRKMNVRGHPLVLRQYYEVTHCNHC 1167
Fly 1168 QTIIWGVSPQGYHCTDCKLNIHRQCSKVVDESCPGPLPQAKRLAHNDKISKFMGKIRPRTSDVIG 1232
Fly 1233 NEKRSRQDEELDVELTPDRGQASIVRQPSDRRPDANISIRSNGNTSC-NTSGLNTTDLQSSFHGS 1296
Fly 1297 CANDSINPGGGAGCNMDLSTSVASTTPST------SGSVAAGLSAFAELNALDTVDKEARRERYS 1355
Fly 1356 QHPKHKSAPVSVNRSES---YK-ERLSNKRNRNSRRKTSDPS-----LSSRPNDEQ--LDLGLSN 1409
Fly 1410 ATYVGSSNSSLSSAGGSESPSTS-----MEHFAAPGAAGGVQVPPMGLNQNQHPHLLIQQHA--- 1466
Fly 1467 -----QQYCQQDSFQAGLAGAAGSSA--------------------ASNSSFWNAGHPLPVARWT 1506
Fly 1507 LESEDEDDVNEADWSSMVAAEVLAALTDAEKKRQEIINEIYQTERNHVRTLKL-LDRLFFLPLYE 1570
Fly 1571 SGLLSQDHLLLLFPPALLSLREIHGAFEQSLKQRRIEHNHVVNTIGDLLADMFDGQSGVVLCEFA 1635
Fly 1636 AQFCARQQIALEALKEKRNKDEMLQKLLKKSESHKACRRLELKDLLPTVLQRLTKYPLLFENLYK 1700
Fly 1701 VTVRLLPENTTEAEAIQRAVESSKRILVEVNQAVKTAEDAHKLQNIQRKLDRSSYDKEEFKKLDL 1765
Fly 1766 TQHHLIHDGNLT---------IKKNPS---VQLHGLLFENMIVLLTKQDDKYYLKNLHTPLSITN 1818
Fly 1819 KPVSPIMSIDADTL-IRQEAADKNSFFLIKMKTSQMLE----LRAPSSSECKTWFKHFSDVAARQ 1878
Fly 1879 SKNRSKNASSNHDTSISDPALAAIPHSNTKESLELSTDTVQPLAATATLTTTPLAPMLPIATVTP 1943
Fly 1944 APATNNSNVSSLTGVQLRNPQRDATASESDADYVNTPKPR-SSQNEVNRTMSIR 1996 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF2 | NP_477317.1 | PDZ | 260..334 | CDD:214570 | 20/114 (18%) |
RGS_GEF_like | 934..1055 | CDD:188710 | 17/124 (14%) | ||
C1_1 | 1151..1202 | CDD:278556 | 4/50 (8%) | ||
RhoGEF | 1539..1731 | CDD:238091 | 48/192 (25%) | ||
PH_RhoGEF | 1770..1875 | CDD:275411 | 27/121 (22%) | ||
DUF2413 | 2242..>2378 | CDD:287302 | |||
Arhgef5 | XP_038964580.1 | ARHGEF5_35 | 1..478 | CDD:406010 | 98/521 (19%) |
PHA03247 | <395..840 | CDD:223021 | 128/794 (16%) | ||
RhoGEF | 1172..1348 | CDD:395496 | 46/187 (25%) | ||
PH_ephexin | 1370..1496 | CDD:269929 | 29/144 (20%) | ||
SH3_ARHGEF5_19 | 1506..1560 | CDD:212873 | 13/81 (16%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |