DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGEF2 and itsn2

DIOPT Version :9

Sequence 1:NP_477317.1 Gene:RhoGEF2 / 36915 FlyBaseID:FBgn0023172 Length:2559 Species:Drosophila melanogaster
Sequence 2:XP_004918243.2 Gene:itsn2 / 100127728 XenbaseID:XB-GENE-1012238 Length:1771 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGEF2NP_477317.1 PDZ 260..334 CDD:214570
RGS_GEF_like 934..1055 CDD:188710
C1_1 1151..1202 CDD:278556
RhoGEF 1539..1731 CDD:238091
PH_RhoGEF 1770..1875 CDD:275411
DUF2413 2242..>2378 CDD:287302
itsn2XP_004918243.2 EH 19..111 CDD:197477
EH 244..323 CDD:197477
PTZ00121 <351..795 CDD:173412
tolA_full 617..>823 CDD:274303
SH3_Intersectin2_1 841..897 CDD:212921
SH3_Intersectin2_2 984..1035 CDD:212923
SH3_Intersectin2_3 1066..1117 CDD:212925
SH3_Intersectin2_4 1138..1196 CDD:212927
SH3_Intersectin2_5 1211..1264 CDD:212929
RhoGEF 1291..1474 CDD:238091
PH_13 1493..1635 CDD:406942
C2_Intersectin 1635..1769 CDD:176021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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