DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8963 and Paip1

DIOPT Version :9

Sequence 1:NP_001163171.1 Gene:CG8963 / 36913 FlyBaseID:FBgn0034181 Length:559 Species:Drosophila melanogaster
Sequence 2:XP_008759000.1 Gene:Paip1 / 365684 RGDID:1305668 Length:480 Species:Rattus norvegicus


Alignment Length:517 Identity:126/517 - (24%)
Similarity:202/517 - (39%) Gaps:119/517 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 GAGGGAPYGQQQPRYVNGFKHHHQQHHQQPHYNHHHNHQQKFNNDMQKLTNSVQNRLHLNSQQGS 166
            |.|||.|.|...|   ||.....:..||.|                               .|..
  Rat    20 GRGGGGPEGGGFP---NGAGPAERSQHQPP-------------------------------PQPK 50

  Fly   167 AGNYYQQQQVHQNTHHHQQHQQQHQPHNQHAKFQRHFHLNNSFQQIVQQTQHNQPQQPHHQQHNQ 231
            |..:.|...:.|.........|...|... |:..|...|               |:|...|:...
  Rat    51 APGFLQPPPLRQPRTAPPPGAQSEAPAGS-ARPPRPGAL---------------PEQTRPQRAPP 99

  Fly   232 QQQQYIQNQNQQ-----PQPSTSTAAASSSSSNSSQ------------------PDMATIALEYL 273
            ..|..|..||.:     ||...:....|..|:|:.:                  .|..|:: ||:
  Rat   100 SSQDKIPQQNSESAMAKPQVVVAPVLMSKLSANAPEFYPSGYSSNYTESYEDGCEDYPTLS-EYV 163

  Fly   274 DTVIHCLNQNPGQFDSIASRFLTIFDGMENNQFVLSIAMEDIFEKSIEQPNFRYMGAKLYNLL-H 337
            ...::.|.:.||.|::...:|....:|.......|...:|.|::::...|||.||||:|.|.| |
  Rat   164 QDFLNHLTEQPGSFETEIEQFAETLNGWVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSH 228

  Fly   338 MLNSKPDS-LFHTLL--KCKLDYHQ-------EEVTKYMRSNEQQKVRETALFLAELY--MQLRG 390
            .|...|.| .|..||  :|:.:|..       :|||:       ::.....|||.|||  ::::|
  Rat   229 HLTISPQSGNFRQLLLQRCRTEYEAKDQAAKGDEVTR-------KRFHAFVLFLGELYLNLEIKG 286

  Fly   391 DDD--SRIQLIAVNIVYSLSKLLASESNENVRCLCQTLKLAGYDLTADCPK-----DIQEIITAL 448
            .:.  :|..::.|.:...|:.|.::..::|:.|..:.|||.| .:..|..|     |::|||..:
  Rat   287 TNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTG-SVLEDTWKEKGKTDMEEIIQRI 350

  Fly   449 QAIELK---SPGKYPMAASVIALQQNNWGRKVSNALGDDEDTVKEPPRLSDEPVFYGPDGRELTA 510
            :.:.|.   |.....|...::.|:.:||||..:.:...:.....:|....:||.||..||...||
  Rat   351 ENVVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYREATPENDPNYFMNEPTFYTSDGVPFTA 415

  Fly   511 EETDFLAGGD-----NDGDDDFDGDGADL---------EIDAEMDEETERAYKEFCKQGKQK 558
            .:.|:.....     .|...|::.:|.||         :||.|||.|.|.||::||.:.::|
  Rat   416 ADPDYQEKYQELLEREDFFPDYEENGTDLSGAGDPYLDDIDDEMDPEIEEAYEKFCLESERK 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8963NP_001163171.1 MIF4G 270..472 CDD:214713 60/224 (27%)
Paip1XP_008759000.1 PHA03160 <36..116 CDD:165431 19/126 (15%)
MIF4G 161..377 CDD:280935 60/223 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353030
Domainoid 1 1.000 65 1.000 Domainoid score I9838
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H4709
Inparanoid 1 1.050 120 1.000 Inparanoid score I4684
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto98454
orthoMCL 1 0.900 - - OOG6_108365
Panther 1 1.100 - - LDO PTHR23254
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5876
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.890

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