DRSC/TRiP Functional Genomics Resources

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Protein Alignment Paip1 and Paip1

DIOPT Version :10

Sequence 1:NP_611180.1 Gene:Paip1 / 36913 FlyBaseID:FBgn0034181 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_663432.1 Gene:Paip1 / 218693 MGIID:2384993 Length:400 Species:Mus musculus


Alignment Length:409 Identity:106/409 - (25%)
Similarity:187/409 - (45%) Gaps:67/409 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 LNNSFQQIVQQTQHNQPQQPHHQQHNQQQQQYIQNQNQQPQPSTSTAAASSSSSNSSQ------- 262
            :::||.:..:||   :||:......::..||..::...:||...:....|..|:|:.:       
Mouse     1 MSDSFDRAPEQT---KPQRAPPSSQDKIPQQNSESAMAKPQVVVAPVLMSKLSANAPEFYPSGYS 62

  Fly   263 -----------PDMATIALEYLDTVIHCLNQNPGQFDSIASRFLTIFDGMENNQFVLSIAMEDIF 316
                       .|..|:: ||:...::.|.:.||.|::...:|....:|.......|...:|.|:
Mouse    63 SNYTESYEDGCEDYPTLS-EYVQDFLNHLTEQPGSFETEIEQFAETLNGWVTTDDALQELVELIY 126

  Fly   317 EKSIEQPNFRYMGAKLYNLL-HMLNSKPDS-LFHTLL--KCKLDYHQ-------EEVTKYMRSNE 370
            :::...|||.||||:|.|.| |.|...|.| .|..||  :|:.:|..       :|||:      
Mouse   127 QQATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQRCRTEYEAKDQAAKGDEVTR------ 185

  Fly   371 QQKVRETALFLAELY--MQLRGDDD--SRIQLIAVNIVYSLSKLLASESNENVRCLCQTLKLAGY 431
             ::.....|||.|||  ::::|.:.  :|..::.|.:...|:.|.::..::|:.|..:.|||.| 
Mouse   186 -KRFHAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTG- 248

  Fly   432 DLTADCPK-----DIQEIITALQAIELK---SPGKYPMAASVIALQQNNWGRKVSNALGDDEDTV 488
            .:..|..|     |::|||..::.:.|.   |.....|...::.|:.:||||..:.:...:....
Mouse   249 SVLEDTWKEKGKTDMEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYREATPE 313

  Fly   489 KEPPRLSDEPVFYGPDGRELTAEETDFLAGGD-----NDGDDDFDGDGADL---------EIDAE 539
            .:|....:||.||..||...||.:.|:.....     .|...|::.:|.||         :||.|
Mouse   314 NDPNYFMNEPTFYTSDGVPFTAADPDYQEKYQELLEREDFFPDYEENGTDLSGAGDPYLDDIDDE 378

  Fly   540 MDEETERAYKEFCKQGKQK 558
            ||.|.|.||::||.:.::|
Mouse   379 MDPEIEEAYEKFCLESERK 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Paip1NP_611180.1 MIF4G 270..472 CDD:214713 60/224 (27%)
Paip1NP_663432.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36 8/34 (24%)
PABPC1-interacting motif-2 (PAM2). /evidence=ECO:0000250|UniProtKB:Q9H074 37..64 6/44 (14%)
PAIP1 middle domain (PAIP1M). /evidence=ECO:0000250|UniProtKB:Q9H074 78..296 64/240 (27%)
MIF4G 81..297 CDD:397130 63/238 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 356..376
PABPC1-interacting motif-1 (PAM1). /evidence=ECO:0000250|UniProtKB:Q9H074 361..400

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