DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8963 and Paip1

DIOPT Version :9

Sequence 1:NP_001163171.1 Gene:CG8963 / 36913 FlyBaseID:FBgn0034181 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_663432.1 Gene:Paip1 / 218693 MGIID:2384993 Length:400 Species:Mus musculus


Alignment Length:409 Identity:106/409 - (25%)
Similarity:187/409 - (45%) Gaps:67/409 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 LNNSFQQIVQQTQHNQPQQPHHQQHNQQQQQYIQNQNQQPQPSTSTAAASSSSSNSSQ------- 262
            :::||.:..:||   :||:......::..||..::...:||...:....|..|:|:.:       
Mouse     1 MSDSFDRAPEQT---KPQRAPPSSQDKIPQQNSESAMAKPQVVVAPVLMSKLSANAPEFYPSGYS 62

  Fly   263 -----------PDMATIALEYLDTVIHCLNQNPGQFDSIASRFLTIFDGMENNQFVLSIAMEDIF 316
                       .|..|:: ||:...::.|.:.||.|::...:|....:|.......|...:|.|:
Mouse    63 SNYTESYEDGCEDYPTLS-EYVQDFLNHLTEQPGSFETEIEQFAETLNGWVTTDDALQELVELIY 126

  Fly   317 EKSIEQPNFRYMGAKLYNLL-HMLNSKPDS-LFHTLL--KCKLDYHQ-------EEVTKYMRSNE 370
            :::...|||.||||:|.|.| |.|...|.| .|..||  :|:.:|..       :|||:      
Mouse   127 QQATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQRCRTEYEAKDQAAKGDEVTR------ 185

  Fly   371 QQKVRETALFLAELY--MQLRGDDD--SRIQLIAVNIVYSLSKLLASESNENVRCLCQTLKLAGY 431
             ::.....|||.|||  ::::|.:.  :|..::.|.:...|:.|.::..::|:.|..:.|||.| 
Mouse   186 -KRFHAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTG- 248

  Fly   432 DLTADCPK-----DIQEIITALQAIELK---SPGKYPMAASVIALQQNNWGRKVSNALGDDEDTV 488
            .:..|..|     |::|||..::.:.|.   |.....|...::.|:.:||||..:.:...:....
Mouse   249 SVLEDTWKEKGKTDMEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYREATPE 313

  Fly   489 KEPPRLSDEPVFYGPDGRELTAEETDFLAGGD-----NDGDDDFDGDGADL---------EIDAE 539
            .:|....:||.||..||...||.:.|:.....     .|...|::.:|.||         :||.|
Mouse   314 NDPNYFMNEPTFYTSDGVPFTAADPDYQEKYQELLEREDFFPDYEENGTDLSGAGDPYLDDIDDE 378

  Fly   540 MDEETERAYKEFCKQGKQK 558
            ||.|.|.||::||.:.::|
Mouse   379 MDPEIEEAYEKFCLESERK 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8963NP_001163171.1 MIF4G 270..472 CDD:214713 60/224 (27%)
Paip1NP_663432.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36 8/37 (22%)
PABPC1-interacting motif-2 (PAM2). /evidence=ECO:0000250 37..64 5/26 (19%)
MIF4G 81..297 CDD:280935 60/223 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 356..376 4/19 (21%)
PABPC1-interacting motif-1 (PAM1). /evidence=ECO:0000250 361..400 15/37 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849399
Domainoid 1 1.000 65 1.000 Domainoid score I10028
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H4709
Inparanoid 1 1.050 120 1.000 Inparanoid score I4762
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto94950
orthoMCL 1 0.900 - - OOG6_108365
Panther 1 1.100 - - LDO PTHR23254
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5126
SonicParanoid 1 1.000 - - X5876
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.920

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