DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ehbp1 and Smtnl1

DIOPT Version :9

Sequence 1:NP_995865.2 Gene:Ehbp1 / 36912 FlyBaseID:FBgn0034180 Length:1141 Species:Drosophila melanogaster
Sequence 2:NP_001178668.1 Gene:Smtnl1 / 311167 RGDID:1311701 Length:470 Species:Rattus norvegicus


Alignment Length:468 Identity:103/468 - (22%)
Similarity:173/468 - (36%) Gaps:147/468 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 SEDPTPLAESFNPLHFELDADGKREAANKLDLPTA--ASGGSSGAEESLKTPNGLQH-------- 289
            |||.|    :.:|....|...|.:..|.::...||  .:.|:.|..:..:.|:|.:|        
  Rat     9 SEDGT----TVSPTAGNLATPGSQGTAEEVAEGTAEEVAEGTVGTNDKEEPPDGAEHLCKAASEG 69

  Fly   290 -----------VVDQTPIKSPDEVKQPKQTPVESLRSKTNEDFDKMVTSTPLEPNVNKDDVKP-- 341
                       ::::....|..|.:..::...:....|..:: |..|:|.  |....|::.||  
  Rat    70 GISGGCQVEASILEELKTDSQGEARGKEEAKADLAEEKGGKE-DTTVSSQ--EDTGKKEETKPEP 131

  Fly   342 ----KKKRALFFTEKE--DEQDLRVES-----------------------VKE------------ 365
                :|:.|:...||:  ||::..:||                       |||            
  Rat   132 SEVTEKEEAVLPLEKQKVDEKETNLESKEKSDVNDKAEPESKEDAGAEVTVKEAETESQKKADVK 196

  Fly   366 -----------------DTTKTIGDNSTTKEKPKEESQSSKDASSVVVPSAKR--PE-------- 403
                             ||.:.:...|.|:|:.::..::..:..:.|:||:..  ||        
  Rat   197 DQAEPQLQEVDGKEARSDTKELVEPGSPTEEQEEQGKENESEERAAVIPSSPEDWPESPTDEGTS 261

  Fly   404 LQPLNL-------------KKSYEPSQTPES--APVPA--------------------------S 427
            |.|..|             .....||:.|||  .|:|:                          .
  Rat   262 LSPDGLGPESTASGETSASASESSPSEVPESPTEPLPSEKKKERAPERRVSAPTRPRGPRAQNRK 326

  Fly   428 VINESIGSCFSTSGSLNNSLKPVEKIV--LKENTPGQDLLEWCKEVTKDYPNVKVTNLTTSWRNG 490
            .|.:..|...|...:|..:.|.....:  :|..     |||||:.:|::|.:|.:.|.::||.:|
  Rat   327 AIMDKFGGAASGPTALFRNTKAAGAAIGGVKNM-----LLEWCRAMTRNYEHVDIQNFSSSWSSG 386

  Fly   491 MAFCAIIHHFVPELIDMSKLSAHDVVGNCRIGFDAAESLG-IPRVIEPRDMNMLTVPDKLAVMTY 554
            |||||:||.|.|:..|.::|.......|..:.|..||.|. ..:::|..||..|.|||...|.||
  Rat   387 MAFCALIHKFFPDAFDYAELDPTKRRHNFTLAFSTAEKLADCAQLLEVDDMVRLAVPDSKCVYTY 451

  Fly   555 LHQLRAHFTGKQL 567
            :.:|......|.|
  Rat   452 IQELYRSLVQKGL 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ehbp1NP_995865.2 NT-C2 12..165 CDD:287345
CH 460..562 CDD:237981 39/102 (38%)
DUF3585 <1027..1122 CDD:288945
Smtnl1NP_001178668.1 CH 357..457 CDD:237981 40/104 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343061
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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