Protein Alignment CG6805 and Synj1

DIOPT Version :10

• Sequence 1: NP_611178.1
• Gene: CG6805 / 36911
• FlyBaseID: FBgn0034179
• Length: 357
• Species: Drosophila melanogaster
• Sequence 2: XP_038944618.1
• Gene: Synj1 / 85238
• RGDID: 69434
• Length: 1609
• Species: Rattus norvegicus
• Alignment Length: 351
• Identity: 114/351 - (32%)
• Similarity: 178/351 - (50%)
• Gaps: 66/351 - (18%)

  Fly    16 TWNVG------THTPRNQDLSSLL----SLNGTTTCPD--NQLPDIYVIGFQEV----------- 57
            ||||.      :...:||.|:..|    .|.|.....|  ::..||:.|||:|:
  Rat   582 TWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAIGFEEMVELNAGNIVNA 646

  Fly    58 STTPQVLKIFNDDPWVLKIADSLS-DHQFVKVDSKQLQGILITMFAQHKHIPHMKEIETEATRTG 121
            |||.|.|       |.:::..::| |:::|.:.|:||.|:.:.:|.:.:|.|.::::..:..:||
  Rat   647 STTNQKL-------WAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTG 704

  Fly   122 LGGLWGNKGAVSIRLSLYGTGVAFVCSHLAAHDEKLKERIEDYHQIVDNHKYNAQGYRRIFDHDF 186
            :||..||||||:||:..:.|.:.|||||.||...::|||.||:.:|.  .|.:....|.:|.||:
  Rat   705 MGGATGNKGAVAIRMLFHTTSLCFVCSHFAAGQSQVKERNEDFVEIA--RKLSFPMGRMLFSHDY 767

  Fly   187 VFWFGDLNFRLSGDMSAWDVRTDVENQRYADLLKLDQLNLLREKGNAFSLLEEQQPNFAPTFKFV 251
            |||.||.|:|:  |:...:|:..:..|.:..|:..|||...:..|..|....|.:..||||:|:.
  Rat   768 VFWCGDFNYRI--DLPNEEVKELIRQQNWDSLIAGDQLINQKNAGQIFRGFLEGKVTFAPTYKYD 830

  Fly   252 EGTNDYNLK---RRPAWCDRILHRVQSNIYPGITLSANQL-----SYQ--SHMDYT--------- 297
            ..:.||:..   |.|||.||:|.|.:.  :| ...||..|     |:|  |.:.||
  Rat   831 LFSEDYDTSEKCRTPAWTDRVLWRRRK--WP-FDRSAEDLDLLNASFQDESKILYTWTPGTLLHY 892

  Fly   298 ------LSDHKPVSATFN---YKVEA 314
                  .|||:||.|..:   ::|||
  Rat   893 GRAELKTSDHRPVVALIDIDIFEVEA 918

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6805	NP_611178.1	EEP	12..308	CDD:469791	111/340 (33%)
Synj1	XP_038944618.1	COG5329	100..523	CDD:227637
		INPP5c_Synj1	576..911	CDD:197332	111/342 (32%)
		RRM_SF	910..1052	CDD:473069	3/9 (33%)
		PHA03247	<1097..1498	CDD:223021