DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6805 and Sh2d1a

DIOPT Version :10

Sequence 1:NP_611178.1 Gene:CG6805 / 36911 FlyBaseID:FBgn0034179 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001102783.2 Gene:Sh2d1a / 501502 RGDID:1562408 Length:126 Species:Rattus norvegicus


Alignment Length:63 Identity:13/63 - (20%)
Similarity:27/63 - (42%) Gaps:11/63 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 LKIADSLSDHQFVKVDSKQLQGI--LITMFAQHKHIPHMKEIETEATRTGLGGLWGNKGAVSI 134
            |.:|..| |..::..||:.:.|:  |..::..:.:...:.:.||        |.|..:.|..:
  Rat    19 LLLATGL-DGSYLLRDSESVPGVYCLCVLYQGYIYTYRVSQTET--------GSWSAETAPGV 72

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6805NP_611178.1 EEP 12..308 CDD:469791 13/63 (21%)
Sh2d1aNP_001102783.2 SH2_SAP1a 2..104 CDD:198263 13/63 (21%)
Interaction with FYN SH3 domain. /evidence=ECO:0000250|UniProtKB:O88890 67..92 1/6 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..126
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.