Protein Alignment CG6805 and Synj1

DIOPT Version :10

• Sequence 1: NP_611178.1
• Gene: CG6805 / 36911
• FlyBaseID: FBgn0034179
• Length: 357
• Species: Drosophila melanogaster
• Sequence 2: XP_011244377.1
• Gene: Synj1 / 104015
• MGIID: 1354961
• Length: 1714
• Species: Mus musculus
• Alignment Length: 351
• Identity: 114/351 - (32%)
• Similarity: 178/351 - (50%)
• Gaps: 66/351 - (18%)

  Fly    16 TWNVG------THTPRNQDLSSLL----SLNGTTTCPD--NQLPDIYVIGFQEV----------- 57
            ||||.      :...:||.|:..|    .|.|.....|  ::..||:.|||:|:
Mouse   686 TWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAIGFEEMVELNAGNIVNA 750

  Fly    58 STTPQVLKIFNDDPWVLKIADSLS-DHQFVKVDSKQLQGILITMFAQHKHIPHMKEIETEATRTG 121
            |||.|.|       |.:::..::| |:::|.:.|:||.|:.:.:|.:.:|.|.::::..:..:||
Mouse   751 STTNQKL-------WAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTG 808

  Fly   122 LGGLWGNKGAVSIRLSLYGTGVAFVCSHLAAHDEKLKERIEDYHQIVDNHKYNAQGYRRIFDHDF 186
            :||..||||||:||:..:.|.:.|||||.||...::|||.||:.:|.  .|.:....|.:|.||:
Mouse   809 MGGATGNKGAVAIRMLFHTTSLCFVCSHFAAGQSQVKERNEDFVEIA--RKLSFPMGRMLFSHDY 871

  Fly   187 VFWFGDLNFRLSGDMSAWDVRTDVENQRYADLLKLDQLNLLREKGNAFSLLEEQQPNFAPTFKFV 251
            |||.||.|:|:  |:...:|:..:..|.:..|:..|||...:..|..|....|.:..||||:|:.
Mouse   872 VFWCGDFNYRI--DLPNEEVKELIRQQNWDSLIAGDQLINQKNAGQIFRGFLEGKVTFAPTYKYD 934

  Fly   252 EGTNDYNLK---RRPAWCDRILHRVQSNIYPGITLSANQL-----SYQ--SHMDYT--------- 297
            ..:.||:..   |.|||.||:|.|.:.  :| ...||..|     |:|  |.:.||
Mouse   935 LFSEDYDTSEKCRTPAWTDRVLWRRRK--WP-FDRSAEDLDLLNASFQDESKILYTWTPGTLLHY 996

  Fly   298 ------LSDHKPVSATFN---YKVEA 314
                  .|||:||.|..:   ::|||
Mouse   997 GRAELKTSDHRPVVALIDIDIFEVEA 1022

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6805	NP_611178.1	EEP	12..308	CDD:469791	111/340 (33%)
Synj1	XP_011244377.1	COG5329	204..627	CDD:227637
		INPP5c_Synj1	680..1015	CDD:197332	111/342 (32%)
		RRM_SF	1014..1155	CDD:473069	3/9 (33%)
		PHA03247	<1207..1609	CDD:223021