DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AsnRS-m and AT1G68420

DIOPT Version :9

Sequence 1:NP_611176.1 Gene:AsnRS-m / 36909 FlyBaseID:FBgn0034177 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_177009.1 Gene:AT1G68420 / 843171 AraportID:AT1G68420 Length:87 Species:Arabidopsis thaliana


Alignment Length:66 Identity:26/66 - (39%)
Similarity:38/66 - (57%) Gaps:1/66 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 LGKTYTLSPAFRAENSKSPLHLAEFYMFEAELAHLEEMEKLAQFIEQMLKSVTNRLLETSGEDLS 287
            :|..||.:|.||||.|.:..|||||:|.|.||| ...:|:.....|.::|.:...|||...:|:.
plant     1 MGDVYTFAPTFRAEKSHTSRHLAEFWMVEVELA-FAGVEEAMNCSEAVVKDMCTTLLEKCRDDME 64

  Fly   288 F 288
            :
plant    65 Y 65

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsnRS-mNP_611176.1 asnC 13..460 CDD:235176 26/66 (39%)
EcAsnRS_like_N 27..101 CDD:239813
AsxRS_core 115..456 CDD:238399 26/66 (39%)
AT1G68420NP_177009.1 PLN02221 <1..>77 CDD:177867 26/66 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0017
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1056670at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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