DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AsnRS-m and AT2G30160

DIOPT Version :9

Sequence 1:NP_611176.1 Gene:AsnRS-m / 36909 FlyBaseID:FBgn0034177 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_180577.1 Gene:AT2G30160 / 817568 AraportID:AT2G30160 Length:331 Species:Arabidopsis thaliana


Alignment Length:30 Identity:10/30 - (33%)
Similarity:15/30 - (50%) Gaps:4/30 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RFYSKSGRIAQILKT--NKPGDSLAIQGWI 33
            ||  ||..|:.:.:|  .|.|.....:||:
plant   270 RF--KSSSISDVFRTIVKKDGYRGLARGWL 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsnRS-mNP_611176.1 asnC 13..460 CDD:235176 6/23 (26%)
EcAsnRS_like_N 27..101 CDD:239813 2/7 (29%)
AsxRS_core 115..456 CDD:238399
AT2G30160NP_180577.1 Mito_carr 35..128 CDD:278578
Mito_carr 128..219 CDD:278578
Mito_carr <249..323 CDD:278578 10/30 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1056670at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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