DRSC/TRiP Functional Genomics Resources

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Protein Alignment AsnRS-m and si:ch211-256m1.8

DIOPT Version :9

Sequence 1:NP_611176.1 Gene:AsnRS-m / 36909 FlyBaseID:FBgn0034177 Length:460 Species:Drosophila melanogaster
Sequence 2:XP_001335682.4 Gene:si:ch211-256m1.8 / 795494 ZFINID:ZDB-GENE-131127-417 Length:1574 Species:Danio rerio


Alignment Length:477 Identity:113/477 - (23%)
Similarity:195/477 - (40%) Gaps:114/477 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 VVVPRTPENQHLAP------GSVIAAVGKIQVAPNGSFELHANQVEMLAEG--RLQEGY------ 108
            |:|||.|....:..      ..:|.||.|:         .|..|..|.|.|  .:.||:      
Zfish  1123 VLVPRKPHTSDIFRMNKSDYTDLIVAVRKV---------AHLLQDAMNARGVAIIFEGFEIDYAH 1178

  Fly   109 ----PFSPKQKHP------PEYVREHLHLRSRVDFVAAQ----MRVRHKAQKAI--HDYMDD--- 154
                |..|:...|      |::...:....:.||...|.    ..:..|..|.|  ..:.|.   
Zfish  1179 AKLIPLVPQTNAPKPPAVAPQFCPTYKGYVTSVDGPPANEEDLSEIHSKITKTIPPQSWQDPLTH 1243

  Fly   155 ----------QDFVQINTPLLTT------NDCEGAGEVFRVQPDSQDLLKQMNRPNIPMEQSYFD 203
                      ::..||...|..:      |.|:..   :.:.|.:.|.:..      ||......
Zfish  1244 ASSAINSKWYRNLFQIQNTLFHSTVEYFNNKCKYG---YALTPITTDTISS------PMGLGSDS 1299

  Fly   204 SKVFLSVSGQ-LHL-EAMTY----------GLGKTYTLSPAFRAENSKSPLHLAEFYMFEAELAH 256
            ..||:::.|| ::| ::|.:          ||...|.:||:||.|:..: .||.:||..|.||  
Zfish  1300 EPVFVNMLGQDVYLADSMQFVLEYFLRFHDGLPGAYYVSPSFRGEDPDA-THLNQFYHVECEL-- 1361

  Fly   257 LEEME--------KLAQFIEQMLKSVTNRLLETSGEDLSFCQRNSNSNSDLPWLQVPWKIMSYDE 313
            |.:|:        .:|...:.|||..::.:|.|:|       :.|::...|..|:.|...::.|:
Zfish  1362 LGDMDVAMSIAEGYVAHLTKAMLKQHSDIILNTAG-------KLSHAQELLKNLEGPLPRVALDQ 1419

  Fly   314 ALQVLQENKDSLKTPISLNEG-------FSKDQELFLVAHCGAPVFVVDWPAQQKPFYMK-VSRS 370
            |:.:: .:.|.|:.   :.||       .::..|..|:...|..|::.:......|||.. :..|
Zfish  1420 AIHIM-PSSDCLEW---VQEGQPQFGRKLTRKGEKVLIEKYGGAVWLTEMDHLGVPFYQAYIEDS 1480

  Fly   371 NPNRVHALDLLMPAVGELCGGSLRESDPAILK---SHPHLPKD-LEWYVDLRKYGGVPTGGFGMG 431
            ..::..|.|||: .:||..|...|.|.|.:::   .|..:|:| .:||:::|:...:.|.|:|||
Zfish  1481 GQSKAKAADLLL-GLGETVGLGERHSTPDMVREALQHHAVPEDSYKWYINMRQVMPLLTSGWGMG 1544

  Fly   432 FERYLQLVTGVKNIRDVIPFPR 453
            .||||..:....::||:...||
Zfish  1545 TERYLCWLLQHNDVRDMQIIPR 1566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsnRS-mNP_611176.1 asnC 13..460 CDD:235176 113/477 (24%)
EcAsnRS_like_N 27..101 CDD:239813 12/48 (25%)
AsxRS_core 115..456 CDD:238399 95/402 (24%)
si:ch211-256m1.8XP_001335682.4 Carn_acyltransf 3..513 CDD:279140
Asparaginase_2 636..916 CDD:271337
PRK10226 639..912 CDD:182319
Hit 1088..1232 CDD:223611 25/117 (21%)
PRK06462 1233..1566 CDD:235808 85/356 (24%)
class_II_aaRS-like_core 1256..1566 CDD:294192 84/333 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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