DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AsnRS-m and nars-1

DIOPT Version :9

Sequence 1:NP_611176.1 Gene:AsnRS-m / 36909 FlyBaseID:FBgn0034177 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_001021405.1 Gene:nars-1 / 172442 WormBaseID:WBGene00003815 Length:545 Species:Caenorhabditis elegans


Alignment Length:492 Identity:128/492 - (26%)
Similarity:208/492 - (42%) Gaps:109/492 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KTNKPGDS-------LAIQGWIKNVRRL-KNNTFLDINDG---------------------STSS 54
            |..|.|:|       ::|:.|:..:||. |:..||.:.||                     ||.:
 Worm   109 KVIKIGESVQHRDQRVSIKAWVHRLRRQGKSLMFLVLRDGYGFLQCVLNDKLCQSYDAVTLSTET 173

  Fly    55 RFQV--VVPRTPENQHLAPGSVIA-----AVGKIQVAPNGSFELHANQ---VEMLAEGRLQEGYP 109
            ..||  ::...|:.:....|..:.     .:||   ||.|..:...|:   |:::.:.|      
 Worm   174 SVQVYGIIKALPDGKSAPDGHELTVDYWEVIGK---APAGGIDNVLNESAGVDVMLDNR------ 229

  Fly   110 FSPKQKHPPEYVREHLHLRSRVDFVAAQMRVRHKAQKAIHDYMDDQDFVQINTPLLTTNDCEGAG 174
                            ||..|.:..:..:|:|..|.:|:.|:.....:.::..|.|.....||..
 Worm   230 ----------------HLVIRGENASRILRIRAAATRAMRDHFFAAGYTEVAPPTLVQTQVEGGS 278

  Fly   175 EVFRVQPDSQDLLKQMNRPNIPMEQSYFDSKVFLSVSGQLHLEAMTYGLGKTYTLSPAFRAENSK 239
            .:|.:                    .|:....:|:.|.||:||.....||..|.:|.::|||.|:
 Worm   279 TLFGL--------------------DYYGEPAYLTQSSQLYLETCNAALGDVYCISQSYRAEKSR 323

  Fly   240 SPLHLAEFYMFEAELAHLEEMEKLAQFIEQMLKSVTNRLL--ETSGEDLSFCQRNSNSNSDLPWL 302
            :..||:|:...|||.|.: ..::|...||.::....:|||  ..:...:.|.    |.....|  
 Worm   324 TRRHLSEYQHVEAECAFI-TFDQLMDRIEALVCDTVDRLLADPVTKSLIEFV----NPGYKAP-- 381

  Fly   303 QVPWKIMSYDEALQVLQEN--KDSLKTPISLNEGFSKDQELFLVAHCGAPVFVVDWPAQQKPFYM 365
            ..|:|.|.|.||::.||:|  ::.:.......|..::..|..:....|.|:.:..:|...|.|||
 Worm   382 ARPFKRMPYKEAIEWLQKNDVRNEMGEKFVYGEDIAEAAERRMTDTIGVPILLNRFPHGIKAFYM 446

  Fly   366 KVSRSNPNRVHALDLLMPAVGELCGGSLRESDPAILKSHPHL---------PKDLEWYVDLRKYG 421
            .....:.....::|||||.|||:.|||:|     |.|....|         .|:..||:|.||||
 Worm   447 PRCADDNELTESVDLLMPGVGEIVGGSMR-----IWKEDQLLAAFEKGGLDSKNYYWYMDQRKYG 506

  Fly   422 GVPTGGFGMGFERYLQLVTGVKNIRDVIPFPRYPHSC 458
            .||.||:|:|.||::..:|...:||||..:||:...|
 Worm   507 SVPHGGYGLGLERFICWLTDTNHIRDVCLYPRFVGRC 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsnRS-mNP_611176.1 asnC 13..460 CDD:235176 128/492 (26%)
EcAsnRS_like_N 27..101 CDD:239813 22/105 (21%)
AsxRS_core 115..456 CDD:238399 100/353 (28%)
nars-1NP_001021405.1 AsnS 108..545 CDD:223096 128/492 (26%)
AsnRS_cyto_like_N 123..206 CDD:239818 15/82 (18%)
AsxRS_core 220..541 CDD:238399 102/374 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1056670at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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