DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AsnRS-m and slc25a28

DIOPT Version :9

Sequence 1:NP_611176.1 Gene:AsnRS-m / 36909 FlyBaseID:FBgn0034177 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_998284.2 Gene:slc25a28 / 100535877 ZFINID:ZDB-GENE-040426-2125 Length:396 Species:Danio rerio


Alignment Length:83 Identity:18/83 - (21%)
Similarity:33/83 - (39%) Gaps:22/83 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 IHD-YMDDQDFVQ-----INTPLLTTNDC-------EGAGEVFRVQPDSQDLLKQMNRPNIPMEQ 199
            :|| .|:..:.|:     .|:|..:..||       |||...:|.......:       |:|.:.
Zfish   208 LHDAAMNPTEVVKQRMQMYNSPYRSVLDCMRCVWQREGALAFYRSYTTQLTM-------NVPFQA 265

  Fly   200 SYFDSKVFLS--VSGQLH 215
            .:|.:..:|.  ::.|.|
Zfish   266 LHFMTYEYLQELLNPQRH 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsnRS-mNP_611176.1 asnC 13..460 CDD:235176 18/83 (22%)
EcAsnRS_like_N 27..101 CDD:239813
AsxRS_core 115..456 CDD:238399 18/83 (22%)
slc25a28NP_998284.2 Mito_carr 96..186 CDD:278578
PTZ00168 100..378 CDD:185494 18/83 (22%)
Mito_carr 194..278 CDD:278578 16/76 (21%)
Mito_carr <304..383 CDD:278578
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1056670at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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