DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AsnRS-m and nars1

DIOPT Version :9

Sequence 1:NP_611176.1 Gene:AsnRS-m / 36909 FlyBaseID:FBgn0034177 Length:460 Species:Drosophila melanogaster
Sequence 2:XP_002934488.2 Gene:nars1 / 100379908 XenbaseID:XB-GENE-965615 Length:558 Species:Xenopus tropicalis


Alignment Length:485 Identity:122/485 - (25%)
Similarity:213/485 - (43%) Gaps:78/485 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QILKTNKP-----------------GDSLAIQGWIKNVRRL-KNNTFLDINDGSTSSRFQVVVP- 61
            :|:.||.|                 |..:.:.||:..:||. |...|:.:.||  :...|.|:. 
 Frog   110 KIVITNDPSLPAPVTLKIRQLEAYRGQRVKVFGWVHRLRRQGKTLMFIVLRDG--TGYLQCVLSD 172

  Fly    62 ---RTPENQHLAPGSVIAAVGKIQVAPN-----GSFELHANQVEML-------AEGRLQEGYPFS 111
               :......|:..|.:|..|.:.:.|:     |..||..:..|::       |:..|.|     
 Frog   173 QLCQCYNGLVLSTESTVAVYGTLNLVPDGKQAPGGHELACDYWEIVGLAPAGGADNLLNE----- 232

  Fly   112 PKQKHPPEYVREHLHLRSRVDFVAAQMRVRHKAQKAIHDYMDDQDFVQINTPLLTTNDCEGAGEV 176
               :...:....:.|:..|.:.::...:||........::..|:.:.:|..|.|.....||...:
 Frog   233 ---ESDVDVQLNNRHMMIRGENMSKIFKVRSTVIHCFRNHFFDRGYYEITPPTLVQTQVEGGSTL 294

  Fly   177 FRVQPDSQDLLKQMNRPNIPMEQSYFDSKVFLSVSGQLHLEAMTYGLGKTYTLSPAFRAENSKSP 241
            |::                    .||..:.:|:.|.||:||.....:|.|:.::.::|||.|::.
 Frog   295 FKL--------------------DYFGEEAYLTQSSQLYLETCIPAMGDTFCIAQSYRAEQSRTR 339

  Fly   242 LHLAEFYMFEAELAHLEEMEKLAQFIEQMLKSVTNRLLETSGEDLSFCQRNSNSNSDLPWLQVPW 306
            .||||:...|||...: ..|.|...:|.::..|.:|:|::....|.:     :.:.:....:.|:
 Frog   340 RHLAEYTHIEAECPFM-TFEDLLNRLEDLVCDVVDRVLKSPVASLLY-----DLHPEFKPPKRPF 398

  Fly   307 KIMSYDEALQVLQEN---KDSLKTPISLNEGFSKDQELFLVAHCGAPVFVVDWPAQQKPFYMKVS 368
            :.|:|.||:..|:|:   ||. .|.....|...:..|..:......|:.:..:||:.|.|||:..
 Frog   399 RRMNYTEAITWLKEHDVKKDD-GTYYEFGEDIPEAPERLMTDSINEPILLCRFPAEIKSFYMQRC 462

  Fly   369 RSNPNRVHALDLLMPAVGELCGGSLRESD-PAILKSHPHLPKDLE---WYVDLRKYGGVPTGGFG 429
            ..:.....::|:|||.|||:.|||:|..| ..:|:.:.....|..   ||.|.||||..|.||:|
 Frog   463 AEDKRLTESVDVLMPNVGEIVGGSMRIWDSEELLEGYKREGIDATPYYWYTDQRKYGTCPHGGYG 527

  Fly   430 MGFERYLQLVTGVKNIRDVIPFPRYPHSCK 459
            :|.||:|..:....:||||..:||:...||
 Frog   528 LGLERFLTWILNRHHIRDVCLYPRFVQRCK 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsnRS-mNP_611176.1 asnC 13..460 CDD:235176 122/485 (25%)
EcAsnRS_like_N 27..101 CDD:239813 19/90 (21%)
AsxRS_core 115..456 CDD:238399 93/347 (27%)
nars1XP_002934488.2 AsnS 124..558 CDD:223096 118/471 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1056670at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.