DRSC/TRiP Functional Genomics Resources

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Protein Alignment ste24a and Oma1

DIOPT Version :10

Sequence 1:NP_611175.1 Gene:ste24a / 36908 FlyBaseID:FBgn0034176 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_001100139.1 Gene:Oma1 / 298282 RGDID:1304821 Length:504 Species:Rattus norvegicus


Alignment Length:168 Identity:41/168 - (24%)
Similarity:66/168 - (39%) Gaps:53/168 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 TDEEVLA-VLGHELGHWKLGHVTKNIIIMQVHLFLMFLVFGNVFKYPPFYVAMGFQPGTRPILVG 359
            ||...|: :||||:.|..|||..:...:  ||| |.||  |.:|                     
  Rat   295 TDMHQLSFLLGHEIAHAVLGHAAEKASL--VHL-LDFL--GMIF--------------------- 333

  Fly   360 LLIVFTYVLAPYNALMNFAMTILSRRFEYQADE--------FAFKLGFAEQLGQALIKLNVDNL- 415
              :...:.:.|.::|......|.|:..||..|.        .|.|:|. :...:|.:.:...:: 
  Rat   334 --LTMIWAICPRDSLAVLGQWIQSKLQEYMFDRPYSRTLEAEADKIGL-QLAAKACVDVRASSVF 395

  Fly   416 -----------GFP-VYDWLYSTWNHSHPTLLQRLNRL 441
                       |:| :.:|| || :.||....:.|:||
  Rat   396 WQQMEFSESLHGYPKLPEWL-ST-HPSHGNRAEYLDRL 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ste24aNP_611175.1 M48A_Zmpste24p_like 11..440 CDD:320702 39/165 (24%)
Oma1NP_001100139.1 Cardiolipin-binding. /evidence=ECO:0000250|UniProtKB:Q9D8H7 127..146
Stress-sensor region. /evidence=ECO:0000250|UniProtKB:Q9D8H7 144..174
M48C_Oma1_like 242..435 CDD:320690 41/168 (24%)
Blue background indicates that the domain is not in the aligned region.

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