DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cbp53E and CMD1

DIOPT Version :9

Sequence 1:NP_001286511.1 Gene:Cbp53E / 36905 FlyBaseID:FBgn0004580 Length:310 Species:Drosophila melanogaster
Sequence 2:NP_009667.1 Gene:CMD1 / 852406 SGDID:S000000313 Length:147 Species:Saccharomyces cerevisiae


Alignment Length:181 Identity:43/181 - (23%)
Similarity:80/181 - (44%) Gaps:40/181 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SRELKKLSANQFMDVWAHYDKDGNGYIEGTELDGFLREFVSSANATDISP-EAVTDTMLEELKSC 92
            |..|.:....:|.:.:|.:|||.||.|..:||...:|       :..:|| ||..:.::.|:   
Yeast     2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMR-------SLGLSPSEAEVNDLMNEI--- 56

  Fly    93 FMEAYDDNQDGKIDIRELAQLL--PMEENFLLLFRFDNPLESSVEFMKIWREYDTDNSGYIEADE 155
                 |.:.:.:|:..|...|:  .::.|           :|..|.::.::.:|.:..|.|.|.|
Yeast    57 -----DVDGNHQIEFSEFLALMSRQLKSN-----------DSEQELLEAFKVFDKNGDGLISAAE 105

  Fly   156 LKNFLRDLLKEAKKINDVSEDKLIEYTDTMLQVFDANKDGRLQLSEMAKLL 206
            ||:.|..:   .:|:.|...|      |.:.:|.|.:  |.:.:.:.|.||
Yeast   106 LKHVLTSI---GEKLTDAEVD------DMLREVSDGS--GEINIQQFAALL 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cbp53ENP_001286511.1 EFh_HEF_CBN 40..301 CDD:320079 41/170 (24%)
EF-hand motif 40..68 CDD:320079 11/27 (41%)
EF-hand motif 89..118 CDD:320079 4/30 (13%)
EF-hand motif 135..164 CDD:320079 9/28 (32%)
EF-hand motif 181..210 CDD:320079 7/26 (27%)
EF-hand motif 228..257 CDD:320079
EF-hand motif 273..301 CDD:320079
CMD1NP_009667.1 PTZ00184 1..145 CDD:185504 41/179 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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