DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cbp53E and cmd-1

DIOPT Version :9

Sequence 1:NP_001286511.1 Gene:Cbp53E / 36905 FlyBaseID:FBgn0004580 Length:310 Species:Drosophila melanogaster
Sequence 2:NP_503386.1 Gene:cmd-1 / 178614 WormBaseID:WBGene00000552 Length:149 Species:Caenorhabditis elegans


Alignment Length:172 Identity:45/172 - (26%)
Similarity:77/172 - (44%) Gaps:35/172 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 QFMDVWAHYDKDGNGYIEGTELDGFLREFVSSANATDISPEAVTDTMLEELKSCFMEAYDDNQDG 103
            :|.:.::.:||||:|.|...||...:|..  ..|.|    ||....|:.|:        |.:.:|
 Worm    12 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPT----EAELQDMINEV--------DADGNG 62

  Fly   104 KIDIRELAQLLPMEENFL-LLFRFDNPLESSVEFMKIWREYDTDNSGYIEADELKNFLRDLLKEA 167
            .||..|          || ::.|.....:|..|..:.:|.:|.|.:|:|.|.||::.:.:|   .
 Worm    63 TIDFPE----------FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL---G 114

  Fly   168 KKINDVSEDKLIEYTDTMLQVFDANKDGRLQLSEMAKLLPVK 209
            :|:.|       |..|.|::..|.:.||::...|...::..|
 Worm   115 EKLTD-------EEVDEMIREADIDGDGQVNYEEFVTMMTTK 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cbp53ENP_001286511.1 EFh_HEF_CBN 40..301 CDD:320079 45/171 (26%)
EF-hand motif 40..68 CDD:320079 10/27 (37%)
EF-hand motif 89..118 CDD:320079 5/28 (18%)
EF-hand motif 135..164 CDD:320079 9/28 (32%)
EF-hand motif 181..210 CDD:320079 7/29 (24%)
EF-hand motif 228..257 CDD:320079
EF-hand motif 273..301 CDD:320079
cmd-1NP_503386.1 PTZ00184 1..149 CDD:185504 44/170 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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