DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9010 and Gapdhs

DIOPT Version :9

Sequence 1:NP_611172.1 Gene:CG9010 / 36904 FlyBaseID:FBgn0034173 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_076454.1 Gene:Gapdhs / 66020 RGDID:620150 Length:432 Species:Rattus norvegicus


Alignment Length:326 Identity:197/326 - (60%)
Similarity:250/326 - (76%) Gaps:2/326 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGINGFGRIGRMFARQALVRKDVKIVAINDPSLDPKYLAYMLRYDSTHGQFNQKISVDGNNLVVN 68
            :||||||||||:..| ..:.|.|::||:|||.:||:|:.||.:||||||::...:......|||:
  Rat   102 VGINGFGRIGRLVLR-VCMEKGVRVVAVNDPFIDPEYMVYMFKYDSTHGRYKGTVEHKNGRLVVD 165

  Fly    69 GKKIQLLKESDVKKIKWCDLGVHTVVECSGRFTTLKACQGHLDSGAKKVVISAPSADAPMFVCGV 133
            ..:|.:.:..:.|:|.|..:|...|||.:|.:.:::|..||:.|||::|:::|||.||||.|.||
  Rat   166 NLEINVFQCKEPKEIPWSSVGNPYVVEATGVYLSIEAASGHISSGARRVIVTAPSPDAPMLVMGV 230

  Fly   134 NLEAYKPGT-AIISNASCTTNCLAPLAKVVHDNFEICEGLMTTVHAATATQKIIDGPSSKLWRDG 197
            |.:.|.||: .::||||||||||||||||:|:.|.|.|||||||||.|||||.:||||.|.||.|
  Rat   231 NEKDYNPGSMTVVSNASCTTNCLAPLAKVIHERFGIVEGLMTTVHAYTATQKTVDGPSKKDWRGG 295

  Fly   198 RSGMTNIIPASTGAAKAVGKVIPDLNGKLTGMAFRVPVPNVSVVDLTCRLSKPAKMDDIKKCIKA 262
            |....||||:|||||||||||||:|||||||||||||.||||||||||||::||....||:.:||
  Rat   296 RGAHQNIIPSSTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLAQPASYTAIKEAVKA 360

  Fly   263 ASKCEMKGILGYVEEEVVSTDFNGSRFASVFDAKACIALNDNFVKLISWYDNETGYSCRLLDLVL 327
            |:|..|.|||.|.|::||||||||...:|:|||||.||||||||||:||||||.|||.|::||:.
  Rat   361 AAKGPMAGILAYTEDQVVSTDFNGDSHSSIFDAKAGIALNDNFVKLVSWYDNEYGYSHRVVDLLR 425

  Fly   328 Y 328
            |
  Rat   426 Y 426

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG9010NP_611172.1 GapA 4..331 CDD:223135 197/326 (60%)
Gp_dh_N 4..150 CDD:278473 65/146 (45%)
Gp_dh_C 155..312 CDD:280894 114/156 (73%)
GapdhsNP_076454.1 Testis-specific N-terminal extension. /evidence=ECO:0000250 1..97
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..101
GapA 102..432 CDD:223135 197/326 (60%)
Gp_dh_N 102..248 CDD:278473 65/146 (45%)
Glyceraldehyde 3-phosphate binding. /evidence=ECO:0000250 247..249 1/1 (100%)
Gp_dh_C 253..410 CDD:280894 114/156 (73%)