DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9010 and Gapdh2

DIOPT Version :9

Sequence 1:NP_611172.1 Gene:CG9010 / 36904 FlyBaseID:FBgn0034173 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001259584.1 Gene:Gapdh2 / 32545 FlyBaseID:FBgn0001092 Length:332 Species:Drosophila melanogaster


Alignment Length:333 Identity:216/333 - (64%)
Similarity:252/333 - (75%) Gaps:1/333 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGIGINGFGRIGRMFARQALVRKDVKIVAINDPSLDPKYLAYMLRYDSTHGQFNQKISVDGNNL 65
            ||.|||||||||||:..| |.:.|...:||:|||.:|..|:.|:.::|||||:|...::.:|..|
  Fly     1 MSKIGINGFGRIGRLVLR-AAIDKGANVVAVNDPFIDVNYMVYLFKFDSTHGRFKGTVAAEGGFL 64

  Fly    66 VVNGKKIQLLKESDVKKIKWCDLGVHTVVECSGRFTTLKACQGHLDSGAKKVVISAPSADAPMFV 130
            ||||:||.:..|.|...|.|...|...:||.:|.|||:.....||..|||||:||||||||||||
  Fly    65 VVNGQKITVFSERDPANINWASAGAEYIVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFV 129

  Fly   131 CGVNLEAYKPGTAIISNASCTTNCLAPLAKVVHDNFEICEGLMTTVHAATATQKIIDGPSSKLWR 195
            |||||:||||...::||||||||||||||||::|||||.|||||||||.|||||.:||||.||||
  Fly   130 CGVNLDAYKPDMKVVSNASCTTNCLAPLAKVINDNFEIVEGLMTTVHATTATQKTVDGPSGKLWR 194

  Fly   196 DGRSGMTNIIPASTGAAKAVGKVIPDLNGKLTGMAFRVPVPNVSVVDLTCRLSKPAKMDDIKKCI 260
            |||....||||||||||||||||||.|||||||||||||.|||||||||.||.|.|..|:||..:
  Fly   195 DGRGAAQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPTPNVSVVDLTVRLGKGASYDEIKAKV 259

  Fly   261 KAASKCEMKGILGYVEEEVVSTDFNGSRFASVFDAKACIALNDNFVKLISWYDNETGYSCRLLDL 325
            :.|:...:||||||.:||||||||.....:|||||||.|:|||.|||||||||||.|||.|::||
  Fly   260 QEAANGPLKGILGYTDEEVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNRVIDL 324

  Fly   326 VLYAQLVD 333
            :.|.|..|
  Fly   325 IKYMQSKD 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9010NP_611172.1 GapA 4..331 CDD:223135 212/326 (65%)
Gp_dh_N 4..150 CDD:278473 78/145 (54%)
Gp_dh_C 155..312 CDD:280894 116/156 (74%)
Gapdh2NP_001259584.1 PLN02272 <2..328 CDD:177912 212/326 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471696
Domainoid 1 1.000 77 1.000 Domainoid score I5730
eggNOG 1 0.900 - - E1_COG0057
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D394372at33208
OrthoFinder 1 1.000 - - FOG0000254
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100218
Panther 1 1.100 - - P PTHR10836
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.750

Return to query results.
Submit another query.