DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9010 and gapdh

DIOPT Version :9

Sequence 1:NP_611172.1 Gene:CG9010 / 36904 FlyBaseID:FBgn0034173 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001108586.1 Gene:gapdh / 317743 ZFINID:ZDB-GENE-030115-1 Length:333 Species:Danio rerio


Alignment Length:328 Identity:211/328 - (64%)
Similarity:251/328 - (76%) Gaps:0/328 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGIGINGFGRIGRMFARQALVRKDVKIVAINDPSLDPKYLAYMLRYDSTHGQFNQKISVDGNNL 65
            |..:||||||||||:..|.|.:.|.|:|||||||.:|..|:.||.:||||||::..::..:|..|
Zfish     1 MVKVGINGFGRIGRLVTRAAFLTKKVEIVAINDPFIDLDYMVYMFQYDSTHGKYKGEVKAEGGKL 65

  Fly    66 VVNGKKIQLLKESDVKKIKWCDLGVHTVVECSGRFTTLKACQGHLDSGAKKVVISAPSADAPMFV 130
            |::|..|.:..|.|...|||.|.|...|||.:|.|||::....|:..|||:|:||||||||||||
Zfish    66 VIDGHAITVYSERDPANIKWGDAGATYVVESTGVFTTIEKASAHIKGGAKRVIISAPSADAPMFV 130

  Fly   131 CGVNLEAYKPGTAIISNASCTTNCLAPLAKVVHDNFEICEGLMTTVHAATATQKIIDGPSSKLWR 195
            .|||.|.|.....::||||||||||||||||::|||.|.||||:||||.|||||.:||||.||||
Zfish   131 MGVNHEKYDNSLTVVSNASCTTNCLAPLAKVINDNFVIVEGLMSTVHAITATQKTVDGPSGKLWR 195

  Fly   196 DGRSGMTNIIPASTGAAKAVGKVIPDLNGKLTGMAFRVPVPNVSVVDLTCRLSKPAKMDDIKKCI 260
            |||....||||||||||||||||||:|||||||||||||.|||||||||.||.||||.|:|||.:
Zfish   196 DGRGASQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTVRLEKPAKYDEIKKVV 260

  Fly   261 KAASKCEMKGILGYVEEEVVSTDFNGSRFASVFDAKACIALNDNFVKLISWYDNETGYSCRLLDL 325
            |||:...|||||||.|.:||||||||...:|:|||.|.|||||:||||::|||||.|||.|:.||
Zfish   261 KAAADGPMKGILGYTEHQVVSTDFNGDCRSSIFDAGAGIALNDHFVKLVTWYDNEFGYSNRVCDL 325

  Fly   326 VLY 328
            :.:
Zfish   326 MAH 328

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG9010NP_611172.1 GapA 4..331 CDD:223135 210/325 (65%)
Gp_dh_N 4..150 CDD:278473 75/145 (52%)
Gp_dh_C 155..312 CDD:280894 118/156 (76%)
gapdhNP_001108586.1 GapA 1..333 CDD:223135 211/328 (64%)
Gp_dh_N 2..150 CDD:278473 75/147 (51%)
Glyceraldehyde 3-phosphate binding. /evidence=ECO:0000250|UniProtKB:P22513 149..151 1/1 (100%)
Gp_dh_C 155..312 CDD:280894 118/156 (76%)