DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9010 and GAPDH

DIOPT Version :9

Sequence 1:NP_611172.1 Gene:CG9010 / 36904 FlyBaseID:FBgn0034173 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001276674.1 Gene:GAPDH / 2597 HGNCID:4141 Length:335 Species:Homo sapiens


Alignment Length:325 Identity:215/325 - (66%)
Similarity:248/325 - (76%) Gaps:0/325 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGINGFGRIGRMFARQALVRKDVKIVAINDPSLDPKYLAYMLRYDSTHGQFNQKISVDGNNLVVN 68
            :|:||||||||:..|.|.....|.|||||||.:|..|:.||.:||||||:|:..:..:...||:|
Human     6 VGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVIN 70

  Fly    69 GKKIQLLKESDVKKIKWCDLGVHTVVECSGRFTTLKACQGHLDSGAKKVVISAPSADAPMFVCGV 133
            |..|.:.:|.|..||||.|.|...|||.:|.|||::....||..|||:|:||||||||||||.||
Human    71 GNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGV 135

  Fly   134 NLEAYKPGTAIISNASCTTNCLAPLAKVVHDNFEICEGLMTTVHAATATQKIIDGPSSKLWRDGR 198
            |.|.|.....||||||||||||||||||:||||.|.|||||||||.|||||.:||||.|||||||
Human   136 NHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGR 200

  Fly   199 SGMTNIIPASTGAAKAVGKVIPDLNGKLTGMAFRVPVPNVSVVDLTCRLSKPAKMDDIKKCIKAA 263
            ..:.||||||||||||||||||:|||||||||||||..|||||||||||.||||.|||||.:|.|
Human   201 GALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANVSVVDLTCRLEKPAKYDDIKKVVKQA 265

  Fly   264 SKCEMKGILGYVEEEVVSTDFNGSRFASVFDAKACIALNDNFVKLISWYDNETGYSCRLLDLVLY 328
            |:..:||||||.|.:|||:|||....:|.|||.|.|||||:|||||||||||.|||.|::||:.:
Human   266 SEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMAH 330

  Fly   329  328
            Human   331  330

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG9010NP_611172.1 GapA 4..331 CDD:223135 215/325 (66%)
Gp_dh_N 4..150 CDD:278473 78/145 (54%)
Gp_dh_C 155..312 CDD:280894 120/156 (77%)
GAPDHNP_001276674.1 PLN02272 2..332 CDD:177912 215/325 (66%)
Interaction with WARS1. /evidence=ECO:0000269|PubMed:15628863 2..148 74/141 (52%)
Glyceraldehyde 3-phosphate binding. /evidence=ECO:0000250|UniProtKB:P22513 151..153 1/1 (100%)