DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9010 and Gapdh

DIOPT Version :10

Sequence 1:NP_611172.1 Gene:CG9010 / 36904 FlyBaseID:FBgn0034173 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_063141587.1 Gene:Gapdh / 24383 RGDID:2661 Length:340 Species:Rattus norvegicus


Alignment Length:328 Identity:218/328 - (66%)
Similarity:250/328 - (76%) Gaps:0/328 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGIGINGFGRIGRMFARQALVRKDVKIVAINDPSLDPKYLAYMLRYDSTHGQFNQKISVDGNNL 65
            |..:|:||||||||:..|.|.....|.|||||||.:|..|:.||.:||||||:||..:..:...|
  Rat     8 MVKVGVNGFGRIGRLVTRAAFSCDKVDIVAINDPFIDLNYMVYMFQYDSTHGKFNGTVKAENGKL 72

  Fly    66 VVNGKKIQLLKESDVKKIKWCDLGVHTVVECSGRFTTLKACQGHLDSGAKKVVISAPSADAPMFV 130
            |:|||.|.:.:|.|...|||.|.|...|||.:|.|||::....||..|||:|:||||||||||||
  Rat    73 VINGKPITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFV 137

  Fly   131 CGVNLEAYKPGTAIISNASCTTNCLAPLAKVVHDNFEICEGLMTTVHAATATQKIIDGPSSKLWR 195
            .|||.|.|.....|:||||||||||||||||:||||.|.|||||||||.|||||.:||||.||||
  Rat   138 MGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWR 202

  Fly   196 DGRSGMTNIIPASTGAAKAVGKVIPDLNGKLTGMAFRVPVPNVSVVDLTCRLSKPAKMDDIKKCI 260
            |||....||||||||||||||||||:|||||||||||||.||||||||||||.||||.|||||.:
  Rat   203 DGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAKYDDIKKVV 267

  Fly   261 KAASKCEMKGILGYVEEEVVSTDFNGSRFASVFDAKACIALNDNFVKLISWYDNETGYSCRLLDL 325
            |.|::..:||||||.|::|||.|||.:..:|.|||.|.|||||||||||||||||.|||.|::||
  Rat   268 KQAAEGPLKGILGYTEDQVVSCDFNSNSHSSTFDAGAGIALNDNFVKLISWYDNEYGYSNRVVDL 332

  Fly   326 VLY 328
            :.|
  Rat   333 MAY 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9010NP_611172.1 GapA 4..328 CDD:439827 216/323 (67%)
GapdhXP_063141587.1 None

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