DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9010 and Gapdh

DIOPT Version :9

Sequence 1:NP_611172.1 Gene:CG9010 / 36904 FlyBaseID:FBgn0034173 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001276655.1 Gene:Gapdh / 14433 MGIID:95640 Length:359 Species:Mus musculus


Alignment Length:328 Identity:218/328 - (66%)
Similarity:252/328 - (76%) Gaps:0/328 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGIGINGFGRIGRMFARQALVRKDVKIVAINDPSLDPKYLAYMLRYDSTHGQFNQKISVDGNNL 65
            |..:|:||||||||:..|.|:....|:|||||||.:|..|:.||.:||||||:||..:..:...|
Mouse    27 MVKVGVNGFGRIGRLVTRAAICSGKVEIVAINDPFIDLNYMVYMFQYDSTHGKFNGTVKAENGKL 91

  Fly    66 VVNGKKIQLLKESDVKKIKWCDLGVHTVVECSGRFTTLKACQGHLDSGAKKVVISAPSADAPMFV 130
            |:|||.|.:.:|.|...|||.:.|...|||.:|.|||::....||..|||:|:||||||||||||
Mouse    92 VINGKPITIFQERDPTNIKWGEAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFV 156

  Fly   131 CGVNLEAYKPGTAIISNASCTTNCLAPLAKVVHDNFEICEGLMTTVHAATATQKIIDGPSSKLWR 195
            .|||.|.|.....|:||||||||||||||||:||||.|.|||||||||.|||||.:||||.||||
Mouse   157 MGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWR 221

  Fly   196 DGRSGMTNIIPASTGAAKAVGKVIPDLNGKLTGMAFRVPVPNVSVVDLTCRLSKPAKMDDIKKCI 260
            |||....||||||||||||||||||:|||||||||||||.||||||||||||.||||.|||||.:
Mouse   222 DGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAKYDDIKKVV 286

  Fly   261 KAASKCEMKGILGYVEEEVVSTDFNGSRFASVFDAKACIALNDNFVKLISWYDNETGYSCRLLDL 325
            |.||:..:||||||.|::|||.|||.:..:|.|||.|.|||||||||||||||||.|||.|::||
Mouse   287 KQASEGPLKGILGYTEDQVVSCDFNSNSHSSTFDAGAGIALNDNFVKLISWYDNEYGYSNRVVDL 351

  Fly   326 VLY 328
            :.|
Mouse   352 MAY 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9010NP_611172.1 GapA 4..331 CDD:223135 217/325 (67%)
Gp_dh_N 4..150 CDD:278473 77/145 (53%)
Gp_dh_C 155..312 CDD:280894 122/156 (78%)
GapdhNP_001276655.1 GapA 27..359 CDD:223135 218/328 (66%)
Gp_dh_N 28..176 CDD:278473 77/147 (52%)
Gp_dh_C 181..338 CDD:280894 122/156 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0057
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53863
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000254
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100218
Panther 1 1.100 - - LDO PTHR10836
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.820

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