DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vha16-4 and LOC5667640

DIOPT Version :10

Sequence 1:NP_611169.1 Gene:Vha16-4 / 36900 FlyBaseID:FBgn0262513 Length:155 Species:Drosophila melanogaster
Sequence 2:XP_061501463.1 Gene:LOC5667640 / 5667640 VectorBaseID:AGAMI1_002524 Length:488 Species:Anopheles gambiae


Alignment Length:91 Identity:23/91 - (25%)
Similarity:30/91 - (32%) Gaps:17/91 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PQLIMKAIVPVVMAGIIAI-YGLVIAVLLAGSLSSPYSAYKGFLNLSAGLAVG-----------V 101
            |.|......|:.:..|..| ||.  |.:...|:..|....||..|:......|           :
Mosquito   288 PPLASDQSQPITVQPIPPIRYGK--ATIRLNSIDIPVRPRKGRRNMKVAFLSGTARFRDRDFMPI 350

  Fly   102 SGMGAGIAIGVVGE-AGVRASAQQPK 126
            .|:|.....|  |. .|.|...||.|
Mosquito   351 GGLGKATPTG--GSFTGKRLEKQQEK 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha16-4NP_611169.1 PRK13469 13..118 CDD:469780 18/81 (22%)
ATP-synt_Vo_c_ATP6C_rpt2 87..153 CDD:349416 13/52 (25%)
LOC5667640XP_061501463.1 None

Return to query results.
Submit another query.