Protein Alignment Vha16-4 and Atp5mc2

DIOPT Version :9

• Sequence 1: NP_611169.1
• Gene: Vha16-4 / 36900
• FlyBaseID: FBgn0262513
• Length: 155
• Species: Drosophila melanogaster
• Sequence 2: NP_598240.1
• Gene: Atp5mc2 / 171082
• RGDID: 620051
• Length: 141
• Species: Rattus norvegicus
• Alignment Length: 126
• Identity: 35/126 - (27%)
• Similarity: 58/126 - (46%)
• Gaps: 36/126 - (28%)

  Fly    40 GISSMSIKHPQLIMKAIVPVVMAGIIAIYGLVIAVLLAGSLSSPYSAYKGFLN-----LSAGLA- 98
            |:|.::::.|   :.:::|                    |.|...||....::     :.||.|
  Rat    40 GLSCLAVRRP---LTSLIP--------------------SRSFQTSAISRDIDTAAKFIGAGAAT 81

  Fly    99 VGVSGMGAGIAIGVVGEAGVRASAQQP----KLFVAIILILIFAEVLGLYGLIVA-IYLFS 154
            |||:|.|||  ||.|..:.:...|:.|    :||...||....:|.:||:.|:|| :.||:
  Rat    82 VGVAGSGAG--IGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha16-4	NP_611169.1	ATP-synt_C	13..118	CDD:294318	21/83 (25%)
		ATP-synt_C	93..152	CDD:278563	25/64 (39%)
Atp5mc2	NP_598240.1	ATP9	67..141	CDD:164765	27/76 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0636
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900