Protein Alignment Vha16-4 and Atp5mc2

DIOPT Version :10

• Sequence 1: NP_611169.1
• Gene: Vha16-4 / 36900
• FlyBaseID: FBgn0262513
• Length: 155
• Species: Drosophila melanogaster
• Sequence 2: NP_598240.1
• Gene: Atp5mc2 / 171082
• RGDID: 620051
• Length: 141
• Species: Rattus norvegicus
• Alignment Length: 126
• Identity: 35/126 - (27%)
• Similarity: 58/126 - (46%)
• Gaps: 36/126 - (28%)

  Fly    40 GISSMSIKHPQLIMKAIVPVVMAGIIAIYGLVIAVLLAGSLSSPYSAYKGFLN-----LSAGLA- 98
            |:|.::::.|   :.:::|                    |.|...||....::     :.||.|
  Rat    40 GLSCLAVRRP---LTSLIP--------------------SRSFQTSAISRDIDTAAKFIGAGAAT 81

  Fly    99 VGVSGMGAGIAIGVVGEAGVRASAQQP----KLFVAIILILIFAEVLGLYGLIVA-IYLFS 154
            |||:|.|||  ||.|..:.:...|:.|    :||...||....:|.:||:.|:|| :.||:
  Rat    82 VGVAGSGAG--IGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha16-4	NP_611169.1	PRK13469	13..118	CDD:469780	21/83 (25%)
		ATP-synt_Vo_c_ATP6C_rpt2	87..153	CDD:349416	25/76 (33%)
Atp5mc2	NP_598240.1	ATP9	67..141	CDD:164765	27/76 (36%)