DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ARAF and araf

DIOPT Version :9

Sequence 1:NP_001243125.1 Gene:ARAF / 369 HGNCID:646 Length:609 Species:Homo sapiens
Sequence 2:XP_031746913.1 Gene:araf / 100495479 XenbaseID:XB-GENE-5755831 Length:644 Species:Xenopus tropicalis


Alignment Length:616 Identity:431/616 - (69%)
Similarity:495/616 - (80%) Gaps:33/616 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     3 PPRG------PPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVV 61
            |.||      |.|.|    ::.|||||||||:|||||.||.||:||||||||||||||:|:||.|
 Frog    52 PSRGASVSEYPHAEG----KSGGTVKVYLPNQQRTVVNVRPGMTVYDSLDKALKVRGLSQECCAV 112

Human    62 YRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQ 126
            ||||:|||.:|.|:|.|.||.||||:||||.||||:||||||||.|:||||||||||||||||||
 Frog   113 YRLIQGRKALTDWETDITPLVGEELMVEVLADVPLSMHNFVRKTHFTLAFCDFCLKFLFHGFRCQ 177

Human   127 TCGYKFHQHCSSKVPTVCVDMSTNRQQPSRFYHSVQDLSGGSRQHEAPSNRPLNELLTPQGPSPR 191
            ||||||||||||||||.||||:...:..:..  |.||...   .:|.|:   ::..|:||.||||
 Frog   178 TCGYKFHQHCSSKVPTACVDMAKLPKPLTPL--SYQDFQS---YYEHPT---VHLPLSPQPPSPR 234

Human   192 TQHCDPEHFPFPAPANAPLQRIRSTSTPNVHMVSTTAPMDSNLIQLTGQSFSTDAAGSRGGSDGT 256
            |||.....|.||.... ||||.|||||||||:.|||.|:|:::|:...:|.:.           |
 Frog   235 TQHPGSASFSFPGEGQ-PLQRHRSTSTPNVHIDSTTGPVDNSIIEEALRSAAV-----------T 287

Human   257 PRGSPSPASVSSGRKSPHSKSPAE-QRERK-SLADDKKKVKNLGYRDSGYYWEVPPSEVQLLKRI 319
            |...|..::...|.|||.:|||:| .|||| |.:|:|||||.||||||.|||||..|||.:||||
 Frog   288 PVDGPPKSAQPLGSKSPQTKSPSETTRERKTSASDEKKKVKQLGYRDSSYYWEVNSSEVIILKRI 352

Human   320 GTGSFGTVFRGRWHGDVAVKVLKVSQPTAEQAQAFKNEMQVLRKTRHVNILLFMGFMTRPGFAII 384
            ||||||||:||:||||||||:|||:.||:||.||||||||||||||||||||||||||||.||||
 Frog   353 GTGSFGTVYRGKWHGDVAVKILKVTNPTSEQIQAFKNEMQVLRKTRHVNILLFMGFMTRPQFAII 417

Human   385 TQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYLHAKNIIHRDLKSNNIFLHEGLTVKIG 449
            ||||||||||.||||.:||||:.||||:|||||||||||||||||||||||||||||||||||||
 Frog   418 TQWCEGSSLYRHLHVIETRFDIFQLIDIARQTAQGMDYLHAKNIIHRDLKSNNIFLHEGLTVKIG 482

Human   450 DFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSH 514
            |||||||||||||:|.:||||||:||||.||||||:.:|||.|||||||||||||||.|.|||::
 Frog   483 DFGLATVKTRWSGSQQVEQPSGSILWMAPEVIRMQESSPYSSQSDVYAYGVVLYELMAGLLPYAN 547

Human   515 IGCRDQIIFMVGRGYLSPDLSKISSNCPKAMRRLLSDCLKFQREERPLFPQILATIELLQRSLPK 579
            |..|||||||||||||:|||||:|:||||||:|||.:||||:|||||||||||::||||||:|||
 Frog   548 INNRDQIIFMVGRGYLTPDLSKVSNNCPKAMKRLLVNCLKFKREERPLFPQILSSIELLQRALPK 612

Human   580 IERSASEPSLHR-TQADELPACLLSAARLVP 609
            |||||||||||| ..:::|...|::..||||
 Frog   613 IERSASEPSLHRAVNSEDLNPFLINTLRLVP 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ARAFNP_001243125.1 Raf_RBD 20..91 CDD:176411 54/70 (77%)
C1_1 99..146 CDD:278556 43/46 (93%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..210 16/46 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 243..293 18/51 (35%)
STKc_A-Raf 312..576 CDD:271052 223/263 (85%)
arafXP_031746913.1 RBD_ARAF 70..142 CDD:340653 55/71 (77%)
C1_A_C-Raf 147..198 CDD:410420 46/50 (92%)
PKc_like 345..609 CDD:419665 223/263 (85%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 452 1.000 Domainoid score I4696
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 831 1.000 Inparanoid score I4193
NCBI 1 1.000 - -
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D129822at33208
OrthoFinder 1 1.000 - - FOG0001587
OrthoInspector 1 1.000 - - oto158965
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X994
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.060

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