DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15614 and MsR1

DIOPT Version :10

Sequence 1:NP_611168.2 Gene:CG15614 / 36899 FlyBaseID:FBgn0034168 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001261324.1 Gene:MsR1 / 38298 FlyBaseID:FBgn0035331 Length:556 Species:Drosophila melanogaster


Alignment Length:521 Identity:97/521 - (18%)
Similarity:157/521 - (30%) Gaps:193/521 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGSSAGLSVAIWSGSSGCSLVFVTTLDGKMSALDMLNGGAERWSIQTGPGPLLSSSIHRLELTN 65
            :.|:|.|......:||:|..|...|                              :.:|..::.:
  Fly   138 LEGNSGGTGTPTSAGSAGIRLAGAT------------------------------ADVHCYDVLS 172

  Fly    66 NGKWVRMIP-------------SLGGSLYKFDGDSIEPIPFSAEDL----LKSSFKFSDDLVISG 113
            | ||.|:.|             :..|::....| .|.|...|||||    |.........:|:.|
  Fly   173 N-KWTRLTPFGEPPTPRAAHVATAVGTMVVIQG-GIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 235

  Fly   114 GKETRSYG-VSMQTGQLIYVCTMQGCKNATEL----AMEMAA----------DGKYGPPEDGAGT 163
            ......|| |....||. |:..:.|......|    |::.||          :|: |||.....|
  Fly   236 PGPGPRYGHVMALVGQR-YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGE-GPPPCMYAT 298

  Fly   164 LDPMQEDVLVI--RRQTQTVRAVES------RTGSERWNFSIG----------HHEV-----EKM 205
            .....:.:|::  .|...:|....:      |.|  ||.::|.          |..|     ..:
  Fly   299 ASARSDGLLLLCGGRDANSVPLASAYGLAKHRDG--RWEWAIAPGVSPSSRYQHAAVFVNARLHV 361

  Fly   206 SNEDCRGGKERREVDPV-ILDLDLRVIIPEGVICAVRK--------------------------- 242
            |.....||:...:...| :||      ...||.|..:.                           
  Fly   362 SGGALGGGRMVEDSSSVAVLD------TAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRC 420

  Fly   243 ----SAPGEIVWRHKFEVPIVSAWRSSGKTNDQLVGVDIFDRTDWMWNGNVDDSESGDRPPLINP 303
                :|.|::::       |....|.....:|.||..|:..........:...:.:.:.||...|
  Fly   421 RHAAAAVGDLIF-------IYGGLRGGVLLDDLLVAEDLAAAETTYAASHAAAAAATNSPPGRLP 478

  Fly   304 SLYIGMHDKQLYIQESAAMIEEREEKMQQLALLTDESKLPAIPWKP----------------LPA 352
            ..|....::...:.||||                |.:.:...|..|                ||.
  Fly   479 GRYGFSDERNRELSESAA----------------DGAVVLGSPVAPPVNGDMHTDISPENALLPG 527

  Fly   353 SR----GIAGLLTDGDNQFQLVKDDEDDAGESTAIARSVLYA-SNYINGNGFFLVYDTERDDEQC 412
            :|    |:..|:             |..|.|:.||:.::..| :..:||       :.|..|..|
  Fly   528 TRRTNKGVEYLV-------------EASAAEAEAISATLAAAKARQVNG-------EVELPDRDC 572

  Fly   413 G 413
            |
  Fly   573 G 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15614NP_611168.2 7tmA_FMRFamide_R-like 40..338 CDD:410630 69/384 (18%)
TM helix 1 41..67 CDD:410630 1/25 (4%)
TM helix 2 73..98 CDD:410630 8/37 (22%)
TM helix 3 112..142 CDD:410630 8/30 (27%)
TM helix 4 157..177 CDD:410630 3/21 (14%)
TM helix 5 200..225 CDD:410630 5/30 (17%)
TM helix 6 257..293 CDD:410630 6/35 (17%)
TM helix 7 306..331 CDD:410630 5/24 (21%)
MsR1NP_001261324.1 7tmA_FMRFamide_R-like 28..420 CDD:410630 61/323 (19%)
TM helix 1 28..53 CDD:410630
TM helix 2 59..84 CDD:410630
TM helix 3 105..135 CDD:410630
TM helix 4 147..167 CDD:410630 5/49 (10%)
TM helix 5 269..294 CDD:410630 7/25 (28%)
TM helix 6 345..375 CDD:410630 5/29 (17%)
TM helix 7 388..413 CDD:410630 1/24 (4%)
Blue background indicates that the domain is not in the aligned region.

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