DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15614 and MsR2

DIOPT Version :10

Sequence 1:NP_611168.2 Gene:CG15614 / 36899 FlyBaseID:FBgn0034168 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001261323.1 Gene:MsR2 / 38296 FlyBaseID:FBgn0264002 Length:647 Species:Drosophila melanogaster


Alignment Length:283 Identity:56/283 - (19%)
Similarity:94/283 - (33%) Gaps:87/283 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 ITMTALSRSYFYSSPTWITYDYQWQTPLFGISTGGANLILACLSLDRFIYLSCFKRNNGAPRFCR 155
            :||..:|.:         |.|..|..|    |.......::.|||...|.|:             
  Fly   204 VTMQVMSST---------TPDVSWAIP----SDSANGTAVSLLSLTTVIPLT------------- 242

  Fly   156 RKVARCIIVVAIGI---------SIVVNMPYFFVFYVSDSGTCHVTEFYYTNFYKVQNWFTFALL 211
                    .::.|:         ::.|...|.....:.|....:.|...|:           .|:
  Fly   243 --------TLSTGVTTSSSLGERNVTVYKLYHSALALRDRQFRNATFLIYS-----------VLI 288

  Fly   212 ALLPAIFLVIGN----GAIIIAFRKWTKQSRICQANN---PAANSRTTAKRYQHQMKL------- 262
            .|:|...|.|.:    ||::.|.|:  ::...|.|.|   |..|.:..........||       
  Fly   289 KLIPCFALTILSVRLIGALLEAKRR--RKILACHAANDMQPIVNGKVVIPTQPKSCKLLEKEKQT 351

  Fly   263 ---TISIVIVITLYLFGELPAHMTSRKSSLNLLFGGDANKVDDSFIEQ----LEVICITLNALQL 320
               |..::.|:.|:|..|.|..:   ...||:|.|       |:|..|    |..:...|..:..
  Fly   352 DRTTRMLLAVLLLFLVTEFPQGI---MGLLNVLLG-------DAFFLQCYLKLSDLMDILALINS 406

  Fly   321 SLNIVVYAVINPSFMPEFFLCLK 343
            |:|.::|..::..|...|.|..:
  Fly   407 SINFILYCSMSRQFRSTFALLFR 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15614NP_611168.2 7tmA_FMRFamide_R-like 40..338 CDD:410630 54/276 (20%)
TM helix 1 41..67 CDD:410630
TM helix 2 73..98 CDD:410630 2/6 (33%)
TM helix 3 112..142 CDD:410630 7/29 (24%)
TM helix 4 157..177 CDD:410630 2/28 (7%)
TM helix 5 200..225 CDD:410630 5/28 (18%)
TM helix 6 257..293 CDD:410630 10/45 (22%)
TM helix 7 306..331 CDD:410630 6/28 (21%)
MsR2NP_001261323.1 7tmA_FMRFamide_R-like 24..424 CDD:410630 54/276 (20%)
TM helix 1 25..51 CDD:410630
TM helix 2 57..82 CDD:410630
TM helix 3 103..133 CDD:410630
TM helix 4 145..165 CDD:410630
TM helix 5 263..302 CDD:410630 9/49 (18%)
TM helix 6 349..379 CDD:410630 6/32 (19%)
TM helix 7 392..417 CDD:410630 5/24 (21%)
Blue background indicates that the domain is not in the aligned region.

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