DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15614 and frpr-6

DIOPT Version :10

Sequence 1:NP_611168.2 Gene:CG15614 / 36899 FlyBaseID:FBgn0034168 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_872220.1 Gene:frpr-6 / 353447 WormBaseID:WBGene00017661 Length:349 Species:Caenorhabditis elegans


Alignment Length:324 Identity:73/324 - (22%)
Similarity:132/324 - (40%) Gaps:63/324 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 GLCTNFINAVVFMRPKMTPSAFSYLA-ALSWMDCISCLLITMTALSRSYFYSSPTW--------- 107
            ||..|.::..|:..|.|..|..::|. :||..| |..||..:...|.||.   |.|         
 Worm    21 GLVGNGLSLYVYTTPNMRKSTVAFLLYSLSICD-IFVLLFALPLYSISYL---PIWDNVYGAWSM 81

  Fly   108 ----ITYDYQWQTPLFGISTGGANLILACLSLDRFIYLSCFKRNNGAPRFCRRKVARCIIVVAIG 168
                |.:..::..||...:...:..|:..::::|:|.: |  |......:|..|.:..|::..|.
 Worm    82 RRMFIAFSTKFFYPLCMTAKTASLYIMVVITVERWIAV-C--RPLQVHIWCTFKNSVRIVIAIIT 143

  Fly   169 ISIVVNMPYFFVFYV--SDS-------GTCHVTE--FYYTNFYKVQNWFTFALLALLPAIFLVIG 222
            .||::|.|.||.:.:  ||:       |.....|  :||.:::.:   .:.....|||.:.:.|.
 Worm   144 FSIILNFPKFFEYQIGYSDALGYWPKRGILDAEEHWWYYISYFII---ISVIFDYLLPFVIMFIA 205

  Fly   223 NGAIIIAFRKWTKQSRICQANNPAANSRTTAKRYQHQMKLTISIVIVITLYLFGELPAHMTSRKS 287
            |..:|...||..|:..:.          ||:  .|.:...|:.:::|..|:.|    .|..|...
 Worm   206 NMKVINELRKSRKERALL----------TTS--LQKEQNTTVMLLVVTILFGF----CHFFSMAL 254

  Fly   288 SL-NLLFGGDANKVDDSFIEQLEVICITLNALQLSLNIVVYAVINPSFMPEFFLCLKGTSDVCF 350
            .| ..:|....|:.::.|...:||           .||::...|..:|...:|...:..:.:|:
 Worm   255 KLFESIFKDFLNRHNEYFEVMIEV-----------SNILIVIHIGTTFFIYYFFSARFRNILCY 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15614NP_611168.2 7tmA_FMRFamide_R-like 40..338 CDD:410630 71/310 (23%)
TM helix 1 41..67 CDD:410630 4/13 (31%)
TM helix 2 73..98 CDD:410630 7/25 (28%)
TM helix 3 112..142 CDD:410630 5/29 (17%)
TM helix 4 157..177 CDD:410630 6/19 (32%)
TM helix 5 200..225 CDD:410630 5/24 (21%)
TM helix 6 257..293 CDD:410630 8/36 (22%)
TM helix 7 306..331 CDD:410630 4/24 (17%)
frpr-6NP_872220.1 7tmA_FMRFamide_R-like 9..305 CDD:410630 72/320 (23%)
TM helix 1 9..35 CDD:410630 4/13 (31%)
TM helix 2 41..67 CDD:410630 8/26 (31%)
TM helix 3 90..120 CDD:410630 5/30 (17%)
TM helix 4 132..152 CDD:410630 6/19 (32%)
TM helix 5 183..208 CDD:410630 5/27 (19%)
TM helix 6 228..258 CDD:410630 8/33 (24%)
TM helix 7 273..298 CDD:410630 7/35 (20%)

Return to query results.
Submit another query.