DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15614 and F52D10.4

DIOPT Version :10

Sequence 1:NP_611168.2 Gene:CG15614 / 36899 FlyBaseID:FBgn0034168 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_509940.3 Gene:F52D10.4 / 186109 WormBaseID:WBGene00009931 Length:400 Species:Caenorhabditis elegans


Alignment Length:450 Identity:87/450 - (19%)
Similarity:135/450 - (30%) Gaps:180/450 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AGNFTSSESGW------------LIGQEHGMQHSDECIFQRRRPTVVLFVLYGLAVPTLSAFGLC 55
            |....|..|.|            :||...|..:|.:.:|.|...|.:|..|.|||:         
 Worm    17 ANECPSPPSSWALAFDGPYSFVVIIGGIIGNVYSLKQLFSRSINTSMLVSLTGLAI--------- 72

  Fly    56 TNFINAVVFMRPKMTPSAFSYLAALSWMDCISCLLITMTALSRSYFYSSPTWITYDY------QW 114
                                      |     .:::.:.||     :....|.|..|      .|
 Worm    73 --------------------------W-----DIVLLIAAL-----WHHSLWATMHYFSLRDEPW 101

  Fly   115 QTPLFGISTGGANLILAC-----------LSLDRFIYLSCFKRNNGAP--RFCRRK--------- 157
            ...:  ::|   |.::.|           ::.:|||.::  :....||  |..|||         
 Worm   102 DAEM--VAT---NALVECGHITSTWMLIEVTAERFIAVT--RPFQFAPVHRKQRRKSYARVVGGL 159

  Fly   158 --------VARCIIVVAIGISIVVNMPYFFVFYVSDSGTCHVTEFYYTNFYKVQNWFTFALLALL 214
                    :|.|:|.:...:...:..   ..:...||.....|......||:|          |.
 Worm   160 IRIPLIMTIAACVICLPCTVEYTLEP---CTYKGIDSQQMLETPLMQNIFYRV----------LY 211

  Fly   215 PAIFLVIGN--GAIIIAFRKWTKQSRICQANNPAANSRTTAKRYQHQMKLTISIVIVITLYLFGE 277
            ...||.||.  |..:|                                   ||.:.:.||   ..
 Worm   212 RTAFLSIGKTFGPFVI-----------------------------------ISFLTISTL---KS 238

  Fly   278 LPAHMTSRKSSL-----NLLFGGDANKVDDSFIEQLEVICITLNALQLSLNIV--VYAVIN---- 331
            :...|.||.|.|     |.||..|.:|.     :.|:.|.|.|....|.|..:  ..|:|.    
 Worm   239 MRKSMDSRASILIAQGQNHLFQADKDKT-----KSLQAISIMLLGKFLFLRCLPTAMAIIQMFPG 298

  Fly   332 -------PSFMPEFFLCLKGTSDVCFGLCCFRA---VRRTWRRCQDKRKQKATAEERVVS 381
                   |.::.:|||.....:: .|.....::   .||..|..|..|:..|...|:|:|
 Worm   299 ADSTTFLPVYLSQFFLLFNSATN-SFVFVVVKSAFETRRLKRIRQRHRELVAQHAEQVLS 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15614NP_611168.2 7tmA_FMRFamide_R-like 40..338 CDD:410630 62/353 (18%)
TM helix 1 41..67 CDD:410630 4/25 (16%)
TM helix 2 73..98 CDD:410630 3/24 (13%)
TM helix 3 112..142 CDD:410630 8/46 (17%)
TM helix 4 157..177 CDD:410630 4/36 (11%)
TM helix 5 200..225 CDD:410630 7/26 (27%)
TM helix 6 257..293 CDD:410630 10/40 (25%)
TM helix 7 306..331 CDD:410630 7/26 (27%)
F52D10.4NP_509940.3 7tmA_FMRFamide_R-like 31..332 CDD:410630 74/409 (18%)
TM helix 1 31..57 CDD:410630 5/25 (20%)
TM helix 2 63..88 CDD:410630 8/69 (12%)
TM helix 3 105..135 CDD:410630 6/34 (18%)
TM helix 4 147..177 CDD:410630 6/29 (21%)
TM helix 5 209..234 CDD:410630 10/69 (14%)
TM helix 6 264..294 CDD:410630 8/34 (24%)
TM helix 7 304..329 CDD:410630 5/25 (20%)

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