DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15614 and npr-41

DIOPT Version :10

Sequence 1:NP_611168.2 Gene:CG15614 / 36899 FlyBaseID:FBgn0034168 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_496459.2 Gene:npr-41 / 181927 WormBaseID:WBGene00007146 Length:394 Species:Caenorhabditis elegans


Alignment Length:369 Identity:74/369 - (20%)
Similarity:150/369 - (40%) Gaps:76/369 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SSESGWLIGQEHGMQHSDECIFQRRRPTVVLFVLYGLAV-PTLSAFGLCTNFINAVVFMRPKMT- 70
            :|:|..:||.......|:....:....::.:.....:|| |.::..||..|.:|..|....|.. 
 Worm    10 ASQSEQIIGSHDFCNFSNITHHEHDEQSISIVWWSNVAVLPVIALIGLACNLLNMAVLTSNKTAR 74

  Fly    71 --PSAFSYLAALSWMDCISCLLITM---------TALSRSY--FYSSPTWITYDYQWQTPLFGIS 122
              || ::.|.||:..|.:..:..|:         .|.|.|:  |||  ..:.|.....:..:..|
 Worm    75 RIPS-WNLLIALAVCDSLFLIFATLDVTPLSIPSLAFSTSFNHFYS--RIVLYIRTLASTFYKSS 136

  Fly   123 TGGANLILACLSLDRFIYLSCFKRNNGAPRFCRRKVARCIIVVAIGISIVVNMPYFFVFYVSDSG 187
            .    ||:...:::|::.:.|...::   |:|..:.::..|..||.:|.:.::.:...:   |:.
 Worm   137 V----LIVVAFNIERYLCVVCPLNSH---RWCTSRNSKNAIATAIVLSFLCSIQWPLAY---DTI 191

  Fly   188 TC---HVTEFYY-----TN-----FYKVQNWFTFALLALLPAIFLVIGNGAIIIAFRKWT----- 234
            .|   :..::||     ||     :|:..::.:.....:||.|.|:..|..||...|:..     
 Worm   192 RCFESNSNQYYYVILMSTNRALQIYYRTMDYVSLFAFNVLPIIGLLYMNSRIIFTLRRVVDEDSR 256

  Fly   235 --KQSRICQA--NNPAANSRTTAKRYQHQMKLTISIVIVITLYLF---GELPAHMTSRKSSLNLL 292
              :::::...  .:.|.|:||        |:....:..|:.:..|   .:.||.:      |..:
 Worm   257 KYEETKLSDGLIQHDAHNNRT--------MRANAMLFAVVFMLFFCVGPQAPARI------LFDM 307

  Fly   293 FGGDANKVDDSFIEQLEVICIT--LNALQLSLNIVVYAVINPSF 334
            :|....|.       :..:|::  |..|..|||..:|.|::..:
 Worm   308 YGQYHPKA-------ILYVCLSQQLVFLNASLNFCLYCVVSKRY 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15614NP_611168.2 7tmA_FMRFamide_R-like 40..338 CDD:410630 69/337 (20%)
TM helix 1 41..67 CDD:410630 8/26 (31%)
TM helix 2 73..98 CDD:410630 6/33 (18%)
TM helix 3 112..142 CDD:410630 4/29 (14%)
TM helix 4 157..177 CDD:410630 4/19 (21%)
TM helix 5 200..225 CDD:410630 6/24 (25%)
TM helix 6 257..293 CDD:410630 6/38 (16%)
TM helix 7 306..331 CDD:410630 8/26 (31%)
npr-41NP_496459.2 7tmA_FMRFamide_R-like 43..348 CDD:410630 69/336 (21%)
TM helix 1 44..70 CDD:410630 8/25 (32%)
TM helix 2 76..103 CDD:410630 7/27 (26%)
TM helix 3 122..152 CDD:410630 5/33 (15%)
TM helix 4 164..184 CDD:410630 4/19 (21%)
TM helix 5 217..242 CDD:410630 6/24 (25%)
TM helix 6 275..304 CDD:410630 7/42 (17%)
TM helix 7 316..341 CDD:410630 8/24 (33%)

Return to query results.
Submit another query.