DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaC and Prkcq

DIOPT Version :9

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001263650.1 Gene:Prkcq / 85420 RGDID:620968 Length:707 Species:Rattus norvegicus


Alignment Length:669 Identity:241/669 - (36%)
Similarity:341/669 - (50%) Gaps:133/669 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 RKGAMKRKGLEMVNGHRFGVRFFKNPTYCGHCKDFIWGFGKQGFQCEECRFNIHQKCCKFVVFKC 121
            |:||:|:..:..|..|.|...||..||:|..|.:|:||..|||:||.:|...||:||...|:.||
  Rat   145 RRGAIKQAKVHHVKCHEFTATFFPQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDKVIAKC 209

  Fly   122 PG-----KDTDFDADCAKV--KHGWISTTYTTPTFCDECGLLLHGVAHQGVKCENCNLNVHHACQ 179
            .|     ::|.|..:..|:  .|.:....|.:||||:.||.||.|:|.||:||:.|.:||||.||
  Rat   210 TGSAINSRETMFHKERFKIDMPHRFKVYNYKSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQ 274

  Fly   180 ETVPPMCGADISEVRGKLLLYVELKGNNLKVDIKEAANLIPMDTNGFSDPYIAVQMHPDRSGRTK 244
            ..|..:||     :..||:              .||..:|                ...:..||.
  Rat   275 TKVANLCG-----INQKLM--------------AEALAMI----------------ESTQQARTL 304

  Fly   245 KKTKTIQKNLNPVFNETFTFELQPQDRDKRLLIEVWDWDRTSRNDFMGSFSFSLEELQKEPVDGW 309
            :.::.|             |...|        ||:             ||..|::. :..|    
  Rat   305 RDSEHI-------------FREGP--------IEI-------------SFPRSIKS-ETRP---- 330

  Fly   310 YKFLSQVEGEHYNIPCVDAFNDIARLRDEVRHDRRPNEKR--------RMDNKDM------PH-N 359
                          |||..                |.:|.        .:|..|.      |. |
  Rat   331 --------------PCVPT----------------PGKKEPQGICWESPLDGADKTAQPPEPEVN 365

  Fly   360 MSKRDM---IRAADFNFVKVIGKGSFGKVLLAERRGTDELYAVKVLRKDVIIQTDDMELPMNEKK 421
            :.:..:   ::..||...|::||||||||.|||.:.|.:.:|:|.|:|||::..||:|..|.||:
  Rat   366 LQRASLQLKLKIDDFILHKMLGKGSFGKVFLAEFKRTKQFFAIKALKKDVVLMDDDVECTMVEKR 430

  Fly   422 ILALSGRPPFLVSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFL 486
            :|:|:...|||..|...|||.:.|||||||..|||||||:|...:|..|.|.|||.|:.:.|.||
  Rat   431 VLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFL 495

  Fly   487 HERDIIYRDLKLDNILLDGEGHVKLVDFGLSKEGVTERQTTRTFCGTPNYMAPEIVSYDPYSIAA 551
            |.:.|:||||||||||||.:||:|:.|||:.||.:.....|.||||||:|:||||:....|:.:.
  Rat   496 HSKGIVYRDLKLDNILLDRDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSV 560

  Fly   552 DWWSFGVLLFEFMAGQAPFEGDDETTVFRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLGAG 616
            |||||||||:|.:.||:||.|.||..:|.:|:.....:|:....||.|::.....::|..|||  
  Rat   561 DWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEREAKDLLVKLFVREPEKRLG-- 623

  Fly   617 RYARQEITTHPFFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDDAFTKEKTDLTPTDKLFMMNL 681
              .|.:|..||.||.::|::.|..|::||.:|.:|...|.||||..|..||..|:..|:..:.::
  Rat   624 --VRGDIRQHPLFREINWEELERKEIDPPFRPKVKSPYDCSNFDKEFLSEKPRLSFADRALINSM 686

  Fly   682 DQNDFIGFSFMNPEFITII 700
            |||.|..|||:||...|:|
  Rat   687 DQNMFSNFSFINPGMETLI 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_1 72..124 CDD:278556 25/56 (45%)
C1_1 137..189 CDD:278556 26/51 (51%)
C2_PKC_alpha_gamma 194..324 CDD:175992 16/129 (12%)
S_TKc 371..629 CDD:214567 126/257 (49%)
STKc_PKC 375..692 CDD:270722 150/316 (47%)
PrkcqNP_001263650.1 C1_1 160..212 CDD:278556 24/51 (47%)
C1_1 232..284 CDD:278556 26/56 (46%)
STKc_nPKC_theta 374..704 CDD:270770 155/333 (47%)
S_TKc 380..634 CDD:214567 126/257 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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