DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inaC and D6PKL1

DIOPT Version :10

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_194391.1 Gene:D6PKL1 / 828768 AraportID:AT4G26610 Length:506 Species:Arabidopsis thaliana


Alignment Length:409 Identity:119/409 - (29%)
Similarity:171/409 - (41%) Gaps:94/409 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 SKRDMIRAADFNFVKVIGKGSFGKVLLAERRGTDELYAVKVLRKDVIIQTDDMELPMNEKKILAL 425
            :|..::....|..:|.:|.|..|.|.|||..||...:|:||:.|..:.....:.....|::||..
plant   113 TKHGVLGLNHFRLLKRLGCGDIGTVHLAELHGTRCFFAMKVMDKGALASRKKLLRAQTEREILQC 177

  Fly   426 SGRPPFLVSMHSCFQTMDRLFFVMEYCKGGDL--MYHMQQYGRFKESVAIFYAVEVAIALFFLHE 488
            ... |||.:::|.|:|......|||:|.||||  :...|...||.|..|.||..||.:|:.:||.
plant   178 LDH-PFLPTLYSHFETEKFSCLVMEFCPGGDLHTLRQRQPGKRFSEQAAKFYVAEVLLAMEYLHM 241

  Fly   489 RDIIYRDLKLDNILLDGEGHVKLVDFGLS----------------KEG----------------- 520
            ..|||||||.:|:|:..:|||.|.||.||                .||                 
plant   242 LGIIYRDLKPENVLVRDDGHVMLSDFDLSLRCTVSPTVVRSTVLASEGQKNSGYCAQPACIQQPS 306

  Fly   521 --------------------------------------VTERQTTR--TFCGTPNYMAPEIVSYD 545
                                                  |.|..:.|  :|.||..|:||||:..:
plant   307 CISAPTTCFSPRYFSSKSKKDKKMKNETGNQVSPLPELVAEPTSARSMSFVGTHEYLAPEIIKGE 371

  Fly   546 PYSIAADWWSFGVLLFEFMAGQAPFEGDDETTVFRNIKDKKAVFPKH--FSVEAMDIITSFLTKK 608
            .:..|.|||:||:.|:|.:.|:.||:|........|:..:...||:.  .|..|.|:|.|.|.|:
plant   372 GHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRSLLVKE 436

  Fly   609 PNNRLGAGRYARQEITTHPFFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDDAFTKEKTDLTPT 673
            |.:||...|.| .|:..||||..|:|.... |...|.|...:.:             |....||.
plant   437 PQHRLAYKRGA-TEMKQHPFFEGVNWALVR-CASPPEIPKPVDY-------------ESAPATPA 486

  Fly   674 DKL-FMMNLDQNDFIGFSF 691
            ... ..:..||::::.|.|
plant   487 AATSTSVKSDQSNYLEFDF 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_cPKC_nPKC_rpt1 71..123 CDD:410342
C1 137..190 CDD:412127
C2_PKC_alpha_gamma 194..324 CDD:175992
STKc_PKC 375..692 CDD:270722 117/395 (30%)
D6PKL1NP_194391.1 STKc_phototropin_like 122..477 CDD:270726 111/357 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.