DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaC and prkca

DIOPT Version :10

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:XP_031750036.1 Gene:prkca / 780209 XenbaseID:XB-GENE-5942870 Length:692 Species:Xenopus tropicalis


Alignment Length:663 Identity:342/663 - (51%)
Similarity:464/663 - (69%) Gaps:26/663 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 RKGAMKRKGLEMVNGHRFGVRFFKNPTYCGHCKDFIWGFGKQGFQCEECRFNIHQKCCKFVVFKC 121
            ||||:::|.:..|..|:|..||||.||:|.||.|||||||||||||:.|.|.:|::|.:||.|.|
 Frog    26 RKGALRQKNVHEVKNHKFIARFFKQPTFCSHCTDFIWGFGKQGFQCQVCCFVVHKRCHEFVTFTC 90

  Fly   122 PGKDTDFDADCAKVKHGWISTTYTTPTFCDECGLLLHGVAHQGVKCENCNLNVHHACQETVPPMC 186
            ||.|...|.|..:.||.:...||.:|||||.||.||:|:.|||:|||.|::|||..|...||.:|
 Frog    91 PGADKGPDTDDPRSKHKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCETCDMNVHKVCVINVPSLC 155

  Fly   187 GADISEVRGKLLLYVELKGNNLKVDIKEAANLIPMDTNGFSDPYIAVQMHPDRSGRTKKKTKTIQ 251
            |.|.:|.||::.|..|:||:.|.|.:::|.||||||.||.||||:.:::.||....:||||||.:
 Frog   156 GMDHTEKRGRIYLKAEVKGDVLNVIVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKKKTKTFR 220

  Fly   252 KNLNPVFNETFTFELQPQDRDKRLLIEVWDWDRTSRNDFMGSFSFSLEELQKEPVDGWYKFLSQV 316
            ..|||.:||.|||:|:|.|:|:||.:|:||||||:|||||||.||.:.||.|.|..||||.|:|.
 Frog   221 STLNPQWNECFTFKLKPTDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMPACGWYKLLNQE 285

  Fly   317 EGEHYNIPCVD-----------AFNDIARLRDEVRHDRRPNEKRRM---DNKDMPHNMSKR---- 363
            |||:||:|..:           .|......||:|   ..|.:|.::   .||.:.....:|    
 Frog   286 EGEYYNVPIPEEEDDGNIELRQKFEGTVPARDKV---VPPVQKAKLGPAGNKVISPTDERRPYVP 347

  Fly   364 ----DMIRAADFNFVKVIGKGSFGKVLLAERRGTDELYAVKVLRKDVIIQTDDMELPMNEKKILA 424
                |.:|..||:|:.|:||||||||:||||:|.|||:|:|:|:|||:||.||:|..|.||::||
 Frog   348 SNNIDSVRLTDFSFLMVLGKGSFGKVMLAERKGADELFAIKILKKDVVIQDDDVECTMVEKRVLA 412

  Fly   425 LSGRPPFLVSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFLHER 489
            |.|:||||..:||||||:|||:|||||..|||||||:||.|:|||..|:|||.|:::.|||||::
 Frog   413 LQGKPPFLTHLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHKK 477

  Fly   490 DIIYRDLKLDNILLDGEGHVKLVDFGLSKEGVTERQTTRTFCGTPNYMAPEIVSYDPYSIAADWW 554
            .|:||||||||::||.|||:|:.|||:.||.:.:..|||||||||:|:||||::|.||..:.|||
 Frog   478 GIVYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGRSVDWW 542

  Fly   555 SFGVLLFEFMAGQAPFEGDDETTVFRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLGAGRYA 619
            ::||||:|.:|||.||:|:||..:|::|.:....:||..|.||:.|....:||.|..|||.|...
 Frog   543 AYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSMSKEAVSICKGLMTKHPVKRLGCGPEG 607

  Fly   620 RQEITTHPFFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDDAFTKEKTDLTPTDKLFMMNLDQN 684
            .::|..|.|||.:||:|.:..|::||.||.: ..|...|||..||:.:..|||.|:|.:.|:||.
 Frog   608 ERDIREHTFFRRIDWEKLQNREIQPPFKPKV-CGKGAENFDKFFTRGQPVLTPPDQLVIANIDQA 671

  Fly   685 DFIGFSFMNPEFI 697
            ||.|||::||:|:
 Frog   672 DFEGFSYINPQFV 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_cPKC_nPKC_rpt1 71..123 CDD:410342 32/51 (63%)
C1 137..190 CDD:412127 28/52 (54%)
C2_PKC_alpha_gamma 194..324 CDD:175992 74/129 (57%)
STKc_PKC 375..692 CDD:270722 176/316 (56%)
prkcaXP_031750036.1 C1_cPKC_rpt1 39..96 CDD:410383 35/56 (63%)
C1_cPKC_rpt2 106..159 CDD:410386 28/52 (54%)
C2_PKC_alpha_gamma 163..293 CDD:175992 74/129 (57%)
STKc_cPKC_alpha 348..688 CDD:270766 184/338 (54%)

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