DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inaC and pkn2a

DIOPT Version :9

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:XP_700704.3 Gene:pkn2a / 571965 ZFINID:ZDB-GENE-061207-42 Length:970 Species:Danio rerio


Alignment Length:502 Identity:188/502 - (37%)
Similarity:256/502 - (50%) Gaps:81/502 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 IPMDTNGFSDPYIAVQMHPDRSGRTKKK-----TK------TIQKNLNPVFNETFTFELQPQDR- 271
            ||...|.|| |..|...|....|....:     ||      |..||.:||    ...|:.|:|: 
Zfish   518 IPSPNNSFS-PLAAETGHSSHPGTPALRSDPIVTKLDFDRDTTPKNYSPV----SVREVLPEDKI 577

  Fly   272 ----DKRLLIEVWDWDRTSRNDFMGSFSFSLEELQKEPVDGWYKFLSQVEGEHYNIPCVDAFNDI 332
                .:|..:..:.: |..||..:  ....|||:                               
Zfish   578 SNKERERGALTAFAY-RNDRNSII--VQSGLEEI------------------------------- 608

  Fly   333 ARLRDEVRHDRRPNEKRRMDNKDMPHNMSKRDMIR---------AADFNFVKVIGKGSFGKVLLA 388
                  |.||..|:..:.:       |:.|...||         ..||..|.|:|:|.|||||||
Zfish   609 ------VEHDTPPSALQLI-------NVQKSTEIRDEEEQFHFSLKDFKCVAVLGRGHFGKVLLA 660

  Fly   389 ERRGTDELYAVKVLRKDVIIQTDDMELPMNEKKILAL--SGRPPFLVSMHSCFQTMDRLFFVMEY 451
            |...|.|::|:|.|:|..|:..|::|..|.||:|...  |.|.||||::.:||||.|.:.|||||
Zfish   661 EYTITGEMFAIKALKKGDIVARDEVESLMCEKRIFETVNSVRHPFLVNLFACFQTKDHVCFVMEY 725

  Fly   452 CKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFLHERDIIYRDLKLDNILLDGEGHVKLVDFGL 516
            ..|||||.|:.. ..|.|..|.|||..|.:.|.||||..|:||||||||:|||.||.||:.||||
Zfish   726 AAGGDLMMHIHA-DVFSEPRATFYAACVVLGLQFLHEHKIVYRDLKLDNLLLDTEGFVKIADFGL 789

  Fly   517 SKEGVTERQTTRTFCGTPNYMAPEIVSYDPYSIAADWWSFGVLLFEFMAGQAPFEGDDETTVFRN 581
            .|||:..|..|.||||||.::|||:::...|:.|.|||..|||:||.:.|::||.||||..||.:
Zfish   790 CKEGMGYRDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDS 854

  Fly   582 IKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLGAGRYARQEITTHPFFRNVDWDKAEACEMEPPI 646
            |.:.:..:|:..|.||:.|:...|.:.|..||||.....:::..|.|||::|||...|.:::||.
Zfish   855 IVNDEVRYPRVLSTEAISIMRRLLRRNPERRLGAAERDAEDVKKHLFFRDIDWDGLLAKKVKPPF 919

  Fly   647 KPMIKHRKDISNFDDAFTKEKTDLTPTDKLFMMNLDQND-FIGFSFM 692
            .|.|:...|:|||||.||.|...|||..:...:|..:.| |..|.::
Zfish   920 VPTIQCSSDVSNFDDEFTSEAPVLTPPREPRPLNQHEQDLFTDFDYI 966

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_1 72..124 CDD:278556
C1_1 137..189 CDD:278556
C2_PKC_alpha_gamma 194..324 CDD:175992 26/120 (22%)
S_TKc 371..629 CDD:214567 126/259 (49%)
STKc_PKC 375..692 CDD:270722 151/319 (47%)
pkn2aXP_700704.3 HR1_PKN_1 29..94 CDD:212012
HR1 116..189 CDD:294066
HR1 201..274 CDD:294066
C2_PKN-like 387..468 CDD:176069
STKc_PKN 643..968 CDD:270741 153/325 (47%)
S_TKc 643..902 CDD:214567 126/259 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583292
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.930

Return to query results.
Submit another query.