DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaC and pkn2a

DIOPT Version :10

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:XP_700704.3 Gene:pkn2a / 571965 ZFINID:ZDB-GENE-061207-42 Length:970 Species:Danio rerio


Alignment Length:502 Identity:188/502 - (37%)
Similarity:256/502 - (50%) Gaps:81/502 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 IPMDTNGFSDPYIAVQMHPDRSGRTKKK-----TK------TIQKNLNPVFNETFTFELQPQDR- 271
            ||...|.|| |..|...|....|....:     ||      |..||.:||    ...|:.|:|: 
Zfish   518 IPSPNNSFS-PLAAETGHSSHPGTPALRSDPIVTKLDFDRDTTPKNYSPV----SVREVLPEDKI 577

  Fly   272 ----DKRLLIEVWDWDRTSRNDFMGSFSFSLEELQKEPVDGWYKFLSQVEGEHYNIPCVDAFNDI 332
                .:|..:..:.: |..||..:  ....|||:                               
Zfish   578 SNKERERGALTAFAY-RNDRNSII--VQSGLEEI------------------------------- 608

  Fly   333 ARLRDEVRHDRRPNEKRRMDNKDMPHNMSKRDMIR---------AADFNFVKVIGKGSFGKVLLA 388
                  |.||..|:..:.:       |:.|...||         ..||..|.|:|:|.|||||||
Zfish   609 ------VEHDTPPSALQLI-------NVQKSTEIRDEEEQFHFSLKDFKCVAVLGRGHFGKVLLA 660

  Fly   389 ERRGTDELYAVKVLRKDVIIQTDDMELPMNEKKILAL--SGRPPFLVSMHSCFQTMDRLFFVMEY 451
            |...|.|::|:|.|:|..|:..|::|..|.||:|...  |.|.||||::.:||||.|.:.|||||
Zfish   661 EYTITGEMFAIKALKKGDIVARDEVESLMCEKRIFETVNSVRHPFLVNLFACFQTKDHVCFVMEY 725

  Fly   452 CKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFLHERDIIYRDLKLDNILLDGEGHVKLVDFGL 516
            ..|||||.|:.. ..|.|..|.|||..|.:.|.||||..|:||||||||:|||.||.||:.||||
Zfish   726 AAGGDLMMHIHA-DVFSEPRATFYAACVVLGLQFLHEHKIVYRDLKLDNLLLDTEGFVKIADFGL 789

  Fly   517 SKEGVTERQTTRTFCGTPNYMAPEIVSYDPYSIAADWWSFGVLLFEFMAGQAPFEGDDETTVFRN 581
            .|||:..|..|.||||||.::|||:::...|:.|.|||..|||:||.:.|::||.||||..||.:
Zfish   790 CKEGMGYRDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDS 854

  Fly   582 IKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLGAGRYARQEITTHPFFRNVDWDKAEACEMEPPI 646
            |.:.:..:|:..|.||:.|:...|.:.|..||||.....:::..|.|||::|||...|.:::||.
Zfish   855 IVNDEVRYPRVLSTEAISIMRRLLRRNPERRLGAAERDAEDVKKHLFFRDIDWDGLLAKKVKPPF 919

  Fly   647 KPMIKHRKDISNFDDAFTKEKTDLTPTDKLFMMNLDQND-FIGFSFM 692
            .|.|:...|:|||||.||.|...|||..:...:|..:.| |..|.::
Zfish   920 VPTIQCSSDVSNFDDEFTSEAPVLTPPREPRPLNQHEQDLFTDFDYI 966

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_cPKC_nPKC_rpt1 71..123 CDD:410342
C1 137..190 CDD:412127
C2_PKC_alpha_gamma 194..324 CDD:175992 26/120 (22%)
STKc_PKC 375..692 CDD:270722 151/319 (47%)
pkn2aXP_700704.3 HR1_PKN_1 29..94 CDD:212012
HR1 116..189 CDD:469609
HR1 201..274 CDD:469609
C2_PKN-like 387..468 CDD:176069
STKc_PKN 643..968 CDD:270741 153/325 (47%)
Blue background indicates that the domain is not in the aligned region.

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