DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inaC and pkn2b

DIOPT Version :9

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:XP_009300691.1 Gene:pkn2b / 567134 ZFINID:ZDB-GENE-061013-393 Length:984 Species:Danio rerio


Alignment Length:522 Identity:187/522 - (35%)
Similarity:273/522 - (52%) Gaps:60/522 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 SEVRGKLLLYVELKGNNLKVDIKEAANLIPMDTNGFS----------DPYIAVQMHPDRSGRTKK 245
            |:.:||..|.......|:....:.....||.....||          ....|...|||.......
Zfish   499 SKQQGKTFLRAPQMNINIATWGRLVRRAIPSVNTSFSPQAADLGSAMSHETAPMGHPDAHSLPSD 563

  Fly   246 KTKTIQKNLNPVFNETFTFELQPQDRDKRLLIEVWDW-------DRTSRNDFMGSFSFSLEELQK 303
            .|.|   .|:  |::..|    |..:...:.:|:.:.       |.....|.:.:|.|....:.|
Zfish   564 PTVT---KLD--FDKAVT----PPSKRNSIEVEIEETAPPDKISDGKEVQDALATFDFLNNTVAK 619

  Fly   304 EPVDGWYKFLSQVEGEHYNIPCVDAFNDIARLRDEVRHDRRPNEKRRMDNKDMPHNMSKRDMIRA 368
            ...|      |.||.|...:              |:...:|..|.|  :.:::..::|       
Zfish   620 PDYD------SLVEHEQPGL--------------ELTEIQRKTEIR--EEEEVQFSLS------- 655

  Fly   369 ADFNFVKVIGKGSFGKVLLAERRGTDELYAVKVLRKDVIIQTDDMELPMNEKKILAL--SGRPPF 431
             ||..|.|:|:|.|||||||:.:.|.|::|:|.|:|..|:..|:::..|.||:|...  |.|.||
Zfish   656 -DFKCVAVLGRGHFGKVLLADYKTTGEMFAIKALKKGDIVARDEVDSLMCEKRIFETVNSVRHPF 719

  Fly   432 LVSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFLHERDIIYRDL 496
            ||::.:||||.:.:.|||||..|||||.|:.. ..|.|:.::|||..|.:.|.|||:..|:||||
Zfish   720 LVNLFACFQTKEHVCFVMEYAAGGDLMMHIHA-DVFSETRSVFYAACVVLGLQFLHDHKIVYRDL 783

  Fly   497 KLDNILLDGEGHVKLVDFGLSKEGVTERQTTRTFCGTPNYMAPEIVSYDPYSIAADWWSFGVLLF 561
            ||||:|||.||:||:.||||.|||:..:..|.||||||.::|||:::...|:.|.|||..|||:|
Zfish   784 KLDNLLLDTEGYVKIADFGLCKEGMGFKDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIF 848

  Fly   562 EFMAGQAPFEGDDETTVFRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLGAGRYARQEITTH 626
            |.:.|::||.||||..||.:|.:.:..:||:.|.||:.|:...|.:.|..|||||....:|:..|
Zfish   849 EMLVGESPFPGDDEEEVFDSIVNDEVRYPKYLSTEAISIMRRLLRRNPERRLGAGERDAEEVKRH 913

  Fly   627 PFFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDDAFTKEKTDLTPTDKLFMMNLDQND-FIGFS 690
            ||||::||....|.::.||..|.|..|:|:|||||.||.|...|||..:..::.|.:.| |..|.
Zfish   914 PFFRDMDWPGLLAKKIRPPFVPTITSREDVSNFDDEFTSEAPILTPPREPRILTLGEQDLFADFD 978

  Fly   691 FM 692
            ::
Zfish   979 YI 980

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_1 72..124 CDD:278556
C1_1 137..189 CDD:278556
C2_PKC_alpha_gamma 194..324 CDD:175992 29/146 (20%)
S_TKc 371..629 CDD:214567 124/259 (48%)
STKc_PKC 375..692 CDD:270722 149/319 (47%)
pkn2bXP_009300691.1 HR1_PKN_1 40..105 CDD:212012
HR1_PKN2_2 126..199 CDD:212021
HR1_PKN2_3 212..285 CDD:212025
C2_PKN-like 394..475 CDD:176069
STKc_PKN 657..982 CDD:270741 151/325 (46%)
S_TKc 657..916 CDD:214567 124/259 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583294
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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