DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaC and PRKCH

DIOPT Version :10

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:XP_047287541.1 Gene:PRKCH / 5583 HGNCID:9403 Length:782 Species:Homo sapiens


Alignment Length:709 Identity:253/709 - (35%)
Similarity:358/709 - (50%) Gaps:172/709 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PAAGAGKGPGN-------------------LLEITGEANIVNYMKNRL-------RKGAMKRKGL 66
            |...:|:|||.                   ::.:||........::|:       |:.||:|: :
Human   202 PNGKSGRGPGRSPFPPSLWVDLEPEGKVFVVITLTGSFTEATLQRDRIFKHFTRKRQRAMRRR-V 265

  Fly    67 EMVNGHRFGVRFFKNPTYCGHCKDFIWG-FGKQGFQCEECRFNIHQKCCKFVVFKCPGKD--TDF 128
            ..:|||:|...:.:.||||.||::|||| |||||:||:.|...:|::|...:|..|..::  ...
Human   266 HQINGHKFMATYLRQPTYCSHCREFIWGVFGKQGYQCQVCTCVVHKRCHHLIVTACTCQNNINKV 330

  Fly   129 DADCAK------VKHGWISTTYTTPTFCDECGLLLHGVAHQGVKCENCNLNVHHACQETVPPMCG 187
            |:..|:      :.|.:....|..|||||.||.||.|:..||::|:.|.:|||..||..|.|.||
Human   331 DSKIAEQRFGINIPHKFSIHNYKVPTFCDHCGSLLWGIMRQGLQCKICKMNVHIRCQANVAPNCG 395

  Fly   188 ADISEVRGKLLLYVELKGNNLKVDIKEAANLIPMDTNGFSDPYIAVQMHPDRSGRTKKKTKTIQK 252
            .:..|: .|.|..:.|:..|    |...:.|:...|                             
Human   396 VNAVEL-AKTLAGMGLQPGN----ISPTSKLVSRST----------------------------- 426

  Fly   253 NLNPVFNETFTFELQPQDRDKRLLIEVWDWDRTSRNDFMGSFSFSLEELQKEPVDGWYKFLSQVE 317
                         |:.|.::                                         |..|
Human   427 -------------LRRQGKE-----------------------------------------SSKE 437

  Fly   318 GEHYNIPCVDAFNDIARLRDEVRHDRRPNEKRRM--DNKDMPHNMSKRDMIRAADFNFVKVIGKG 380
            |....:                      |...|:  ||                 |.|::|:|||
Human   438 GNGIGV----------------------NSSNRLGIDN-----------------FEFIRVLGKG 463

  Fly   381 SFGKVLLAERRGTDELYAVKVLRKDVIIQTDDMELPMNEKKILALSGRPPFLVSMHSCFQTMDRL 445
            |||||:||..:.|.:|||||||:||||:|.||:|..|.||:||:|:...|||..:..||||.|||
Human   464 SFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 528

  Fly   446 FFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFLHERDIIYRDLKLDNILLDGEGHVK 510
            |||||:..|||||:|:|:..||.|:.|.|||.|:..||.|||::.||||||||||:|||.|||.|
Human   529 FFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCK 593

  Fly   511 LVDFGLSKEGVTERQTTRTFCGTPNYMAPEIVSYDPYSIAADWWSFGVLLFEFMAGQAPFEGDDE 575
            |.|||:.|||:....||.||||||:|:||||:....|..|.|||:.||||:|.:.|.||||.::|
Human   594 LADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE 658

  Fly   576 TTVFRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLGA----GRYARQEITTHPFFRNVDWDK 636
            ..:|..|.:.:.|:|.....:|..|:.||:||.|..|||:    |.:|   |..||||:.:||.:
Human   659 DDLFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHA---ILRHPFFKEIDWAQ 720

  Fly   637 AEACEMEPPIKPMIKHRKDISNFDDAFTKEKTDLTPTDKLFMMNLDQNDFIGFSFMNPE 695
            ....::|||.:|.||.|:|:||||..|.||:..|||.|:..:..::|::|..||:::||
Human   721 LNHRQIEPPFRPRIKSREDVSNFDPDFIKEEPVLTPIDEGHLPMINQDEFRNFSYVSPE 779

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_cPKC_nPKC_rpt1 71..123 CDD:410342 25/52 (48%)
C1 137..190 CDD:412127 25/52 (48%)
C2_PKC_alpha_gamma 194..324 CDD:175992 12/129 (9%)
STKc_PKC 375..692 CDD:270722 167/320 (52%)
PRKCHXP_047287541.1 C2_PKC_epsilon 8..122 CDD:175981
C1_nPKC_epsilon-like_rpt1 265..325 CDD:410385 26/59 (44%)
C1_nPKC_epsilon-like_rpt2 343..397 CDD:410388 25/53 (47%)
STKc_nPKC_eta 458..780 CDD:270742 169/325 (52%)
Blue background indicates that the domain is not in the aligned region.

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