DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaC and prkcz

DIOPT Version :9

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:XP_009302121.1 Gene:prkcz / 555737 ZFINID:ZDB-GENE-070511-1 Length:603 Species:Danio rerio


Alignment Length:700 Identity:210/700 - (30%)
Similarity:305/700 - (43%) Gaps:223/700 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 PSVPSAAPGAKAPAAGAGKGPGNLLEITGEANIVNYMKNRLRKGAMKRKGLEMVNGHRFGVRFFK 80
            ||:|. .||...|               ||.      |:..|:||.:.:.|..||||.|..:.|.
Zfish    97 PSIPE-KPGMPCP---------------GED------KSIYRRGARRWRKLYRVNGHLFQAKRFN 139

  Fly    81 NPTYCGHCKDFIWGFGKQGFQCEECRFNIHQKCCKFVVFKCPGKDTDFDADCAKVKHGWISTTYT 145
            ...|||||.:.|||.|:||::|..|:..:|::|.|                              
Zfish   140 RKAYCGHCSERIWGLGRQGYKCINCKLLVHKRCHK------------------------------ 174

  Fly   146 TPTFCDECGLLLHGVAHQGVKCENCNLNVHHACQETVPPMCGADISEVRGKLLLYVELKGNNLKV 210
                                                                             
Zfish   175 ----------------------------------------------------------------- 174

  Fly   211 DIKEAANLIPMDTNGFSDPYIAVQ---MHPDRSGRTKKKTKTIQKNLNPVFNETFTFELQPQDRD 272
                   |:|:......||.:..|   :..|:||.                    ..||.|:|. 
Zfish   175 -------LVPLTCQRHMDPVMPSQEPLVDDDKSGE--------------------EVELPPEDP- 211

  Fly   273 KRLLIEVWDWDRTSRNDFMGSFSFSLEELQKEPVDGWYKFLSQVEGEHYNIPCVDAFNDIARLRD 337
                                      |:....||    .||:                       
Zfish   212 --------------------------EDTDAIPV----PFLA----------------------- 223

  Fly   338 EVRHDRRPNEKRRMDNKDMP------HNMSKRDMIRAADFNFVKVIGKGSFGKVLLAERRGTDEL 396
               |:|:. ||...|::|:.      ..:.....:...||:.::|||:||:.||||...:..:::
Zfish   224 ---HNRKV-EKAEDDSEDLKAVVDGIEGIQISQCLGLGDFDLIRVIGRGSYAKVLLVRLKKNEQI 284

  Fly   397 YAVKVLRKDVIIQTD----DMELPMNEKKILALSGRPPFLVSMHSCFQTMDRLFFVMEYCKGGDL 457
            ||:||::|:::...:    |::....||.:...:...||||.:||||||..|||.|:||..||||
Zfish   285 YAMKVVKKELVHDDERKRKDIDWVQTEKHVFEQASTNPFLVGLHSCFQTESRLFLVIEYVNGGDL 349

  Fly   458 MYHMQQYGRFKESVAIFYAVEVAIALFFLHERDIIYRDLKLDNILLDGEGHVKLVDFGLSKEGVT 522
            |:|||:..:..|..|.|||.|:.|||.||||:.||||||||||:|||.:||:||.|:|:.|||:.
Zfish   350 MFHMQRQRKLPEEHARFYAAEICIALNFLHEKGIIYRDLKLDNVLLDQDGHIKLTDYGMCKEGIR 414

  Fly   523 ERQTTRTFCGTPNYMAPEIVSYDPYSIAADWWSFGVLLFEFMAGQAPF-------EGDDETTVFR 580
            ...||.||||||||:||||:..:.|..:.|||:.|||:||.|||::||       :.:.|..:|:
Zfish   415 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEEYLFQ 479

  Fly   581 NIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLGAG-RYARQEITTHPFFRNVDWDKAEACEMEP 644
            .|.:|....|:..||:|..::..||.|.|..|||.. :....:|.:|.|||::|||:.|..::.|
Zfish   480 VILEKPIRIPRSLSVKAASVLKGFLNKDPKERLGCQVQTGFTDIKSHTFFRSIDWDQLEQKQVTP 544

  Fly   645 PIKPMIKHRKDISNFDDAFTKEKTDLTPTDKLFMMNLDQNDFIGFSFMNP 694
            |.||.|.....:.|||..||.|...|||.|:..:..:||::|.||.::||
Zfish   545 PFKPQITDDYGLENFDTQFTNEPVQLTPDDEDVIKRIDQSEFEGFEYINP 594

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_1 72..124 CDD:278556 19/51 (37%)
C1_1 137..189 CDD:278556 0/51 (0%)
C2_PKC_alpha_gamma 194..324 CDD:175992 17/132 (13%)
S_TKc 371..629 CDD:214567 122/269 (45%)
STKc_PKC 375..692 CDD:270722 148/328 (45%)