DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inaC and Pkc53E

DIOPT Version :9

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_725626.1 Gene:Pkc53E / 48311 FlyBaseID:FBgn0003091 Length:679 Species:Drosophila melanogaster


Alignment Length:667 Identity:382/667 - (57%)
Similarity:498/667 - (74%) Gaps:21/667 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 GEANIVNYMKNRLRKGAMKRKGLEMVNGHRFGVRFFKNPTYCGHCKDFI--------W-GFGKQG 99
            |||...|.||:||||||:|:|.:..|..|.|..||||.||:|.||||||        | ||||||
  Fly    18 GEAVGENKMKSRLRKGALKKKNVFNVKDHCFIARFFKQPTFCSHCKDFICGYQSGYAWMGFGKQG 82

  Fly   100 FQCEECRFNIHQKCCKFVVFKCPGKDTDFDADCAKVKHGWISTTYTTPTFCDECGLLLHGVAHQG 164
            |||:.|.:.:|::|.::|.|.|||||...|:|..|.:|.:...||..|||||.||.||:|:.|||
  Fly    83 FQCQVCSYVVHKRCHEYVTFICPGKDKGIDSDSPKTQHNFEPFTYAGPTFCDHCGSLLYGIYHQG 147

  Fly   165 VKCENCNLNVHHACQETVPPMCGADISEVRGKLLLYVELKGNNLKVDIKEAANLIPMDTNGFSDP 229
            :||..|::|||..|:|.||.:||.|.:|.||::.|.:.:|.|.|.|.|||..||||||.||.|||
  Fly   148 LKCSACDMNVHARCKENVPSLCGCDHTERRGRIYLEINVKENLLTVQIKEGRNLIPMDPNGLSDP 212

  Fly   230 YIAVQMHPDRSGRTKKKTKTIQKNLNPVFNETFTFELQPQDRDKRLLIEVWDWDRTSRNDFMGSF 294
            |:.|::.||...::||||:||:..||||:|||.|::|:|:|:|:|:|||||||||||||||||:.
  Fly   213 YVKVKLIPDDKDQSKKKTRTIKACLNPVWNETLTYDLKPEDKDRRILIEVWDWDRTSRNDFMGAL 277

  Fly   295 SFSLEELQKEPVDGWYKFLSQVEGEHYNIPCVDAFNDIARLRDEVRHDRRPNEKR----RMDNKD 355
            ||.:.|:.|.|.:||:|.|:|.|||:||:||.|...|:.:|:      ::|::|:    |.|.. 
  Fly   278 SFGISEIIKNPTNGWFKLLTQDEGEYYNVPCADDEQDLLKLK------QKPSQKKPMVMRSDTN- 335

  Fly   356 MPHNMSKRDMIRAADFNFVKVIGKGSFGKVLLAERRGTDELYAVKVLRKDVIIQTDDMELPMNEK 420
             .|..||:|||||.||||:||:|||||||||||||:|::||||:|:|:||||||.||:|..|.||
  Fly   336 -THTSSKKDMIRATDFNFIKVLGKGSFGKVLLAERKGSEELYAIKILKKDVIIQDDDVECTMIEK 399

  Fly   421 KILALSGRPPFLVSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFF 485
            ::|||..:|||||.:||||||||||||||||..|||||:.:||:|:|||.||:|||.|:|..|||
  Fly   400 RVLALGEKPPFLVQLHSCFQTMDRLFFVMEYVNGGDLMFQIQQFGKFKEPVAVFYAAEIAAGLFF 464

  Fly   486 LHERDIIYRDLKLDNILLDGEGHVKLVDFGLSKEGVTERQTTRTFCGTPNYMAPEIVSYDPYSIA 550
            ||.:.|:||||||||:|||.:||||:.|||:.||.:...:||:||||||:|:||||:.|.||..:
  Fly   465 LHTKGILYRDLKLDNVLLDADGHVKIADFGMCKENIVGDKTTKTFCGTPDYIAPEIILYQPYGKS 529

  Fly   551 ADWWSFGVLLFEFMAGQAPFEGDDETTVFRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLGA 615
            .|||::||||:|.:.||.||:|:||..:|..|.|....:||..|.||.:....||||:||.|||.
  Fly   530 VDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHNVSYPKSLSKEAKEACKGFLTKQPNKRLGC 594

  Fly   616 GRYARQEITTHPFFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDDAFTKEKTDLTPTDKLFMMN 680
            |....:::..|||||.:||:|.|..|::||.||.||||||:||||..||.||||||||||:||||
  Fly   595 GSSGEEDVRLHPFFRRIDWEKIENREVQPPFKPKIKHRKDVSNFDKQFTSEKTDLTPTDKVFMMN 659

  Fly   681 LDQNDFIGFSFMNPEFI 697
            |||::|:|||:||||::
  Fly   660 LDQSEFVGFSYMNPEYV 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_1 72..124 CDD:278556 32/60 (53%)
C1_1 137..189 CDD:278556 28/51 (55%)
C2_PKC_alpha_gamma 194..324 CDD:175992 76/129 (59%)
S_TKc 371..629 CDD:214567 156/257 (61%)
STKc_PKC 375..692 CDD:270722 198/316 (63%)
Pkc53ENP_725626.1 C1_cPKC_rpt1 44..110 CDD:410383 35/65 (54%)
C1_cPKC_rpt2 120..173 CDD:410386 28/52 (54%)
C2_PKC_alpha_gamma 177..307 CDD:175992 76/129 (59%)
STKc_cPKC 353..672 CDD:270739 198/318 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450112
Domainoid 1 1.000 69 1.000 Domainoid score I3424
eggNOG 1 0.900 - - E1_KOG0696
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 206 1.000 Inparanoid score I1276
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D143719at33208
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 1 1.000 - - otm46471
orthoMCL 1 0.900 - - OOG6_103255
Panther 1 1.100 - - P PTHR24356
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
109.800

Return to query results.
Submit another query.