DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inaC and CG32944

DIOPT Version :9

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_788574.3 Gene:CG32944 / 40560 FlyBaseID:FBgn0052944 Length:576 Species:Drosophila melanogaster


Alignment Length:444 Identity:128/444 - (28%)
Similarity:200/444 - (45%) Gaps:66/444 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 LQPQDRDKRLLIEVWDWDRTSR------------NDF---MGSFSFSLEELQKEPVDGWYKFLSQ 315
            :|..:|.:.||..:|. .|.:|            :||   :.|....|.||:       ..||.:
  Fly    25 MQSYERCRPLLGSIWR-HRLTRISLNLLEIPLLGDDFRFLLASACQQLHELR-------ISFLGR 81

  Fly   316 VEGEHYNIPCVDAFNDIARLRDEVRH-----DRRPNEKRRMDNKDMP--HNMSKRDM-------- 365
               ||:....:..|.::..|:.:|..     .|:..:..::..|..|  |:::...|        
  Fly    82 ---EHFQALIMHCFPNLWLLQVDVLPPFFLCPRQRLQLIQIIPKFHPEDHSLAMGHMLCVKCQSL 143

  Fly   366 --IRAADFNFVKVIGKGSFGKVLLAERRGTDELYAVKVLRKDVIIQTDDMELPMNEKKILALSGR 428
              |....|..::.|||||||||.:.::|.|..|||:|.:.:........:...:.|.::|: |..
  Fly   144 IPINFDHFQILRAIGKGSFGKVCIVQKRDTGILYAMKYVSRSACEMRGALGGVIKEVELLS-SLE 207

  Fly   429 PPFLVSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFLHERDIIY 493
            .||||::...||..:.||.|.:...||||.||:|....|.|........|:..||.:|....:::
  Fly   208 HPFLVNLWFSFQDEEDLFMVCDLLTGGDLRYHLQNRVEFSEQSVALLVCELGSALEYLQANRVVH 272

  Fly   494 RDLKLDNILLDGEGHVKLVDFGLSKEGVTERQTTRTFC---GTPNYMAPEI--VSYDP---YSIA 550
            ||:|.||||||..||..|.||.::    |..|.....|   ||..|||||:  .:.|.   ||..
  Fly   273 RDIKPDNILLDDAGHAHLTDFNIA----TRLQKNALACSMSGTKPYMAPEVFLCALDEVAGYSYP 333

  Fly   551 ADWWSFGVLLFEFMAGQAPFEGDDETTV--FRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRL 613
            .||||.||:.:|......||.....|.:  .:||.:....:|:::|...:|::...|:..|..|:
  Fly   334 VDWWSLGVVAYEMRGNIRPFVVHSNTPLAEIKNILNTPVHYPRYWSSNFVDLLQRLLSTYPGARI 398

  Fly   614 GAGRYARQEITTHPFFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDDAFTKEK 667
            .    .|||:...|..||:|:.:.    :|..|||:.|..:|..|.|.....|:
  Fly   399 S----TRQELHQTPMLRNIDFQRV----LEKKIKPIYKPPEDHLNCDPCLELEE 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_1 72..124 CDD:278556
C1_1 137..189 CDD:278556
C2_PKC_alpha_gamma 194..324 CDD:175992 17/72 (24%)
S_TKc 371..629 CDD:214567 90/267 (34%)
STKc_PKC 375..692 CDD:270722 101/303 (33%)
CG32944NP_788574.3 STKc_Yank1 150..410 CDD:270730 90/268 (34%)
S_TKc 151..405 CDD:214567 89/262 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24356
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.