DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaC and prkcbb

DIOPT Version :10

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_957272.1 Gene:prkcbb / 393953 ZFINID:ZDB-GENE-040426-1178 Length:670 Species:Danio rerio


Alignment Length:656 Identity:347/656 - (52%)
Similarity:465/656 - (70%) Gaps:19/656 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 MKNRLRKGAMKRKGLEMVNGHRFGVRFFKNPTYCGHCKDFIWGFGKQGFQCEECRFNIHQKCCKF 116
            |:...|:||:::|.:..|..|:|..||||.||:|.||.|||||||||||||:.|.|.:|::|.:|
Zfish    16 MRGFARQGALRQKNVHEVKNHKFIARFFKQPTFCSHCTDFIWGFGKQGFQCQVCCFVVHKRCHEF 80

  Fly   117 VVFKCPGKDTDFDADCAKVKHGWISTTYTTPTFCDECGLLLHGVAHQGVKCENCNLNVHHACQET 181
            |.|.|||.|....:|..:.||.:...||::|||||.||.||:|:.|||::|::|.:|:|..|...
Zfish    81 VTFSCPGADKGPASDDPRSKHKFKVHTYSSPTFCDHCGSLLYGLIHQGMRCDHCMMNIHKRCVAN 145

  Fly   182 VPPMCGADISEVRGKLLLYVELKGNNLKVDIKEAANLIPMDTNGFSDPYIAVQMHPDRSGRTKKK 246
            ||.:||.|.:|.||::.:..|:|.|.|.|.||||.||:|||.||.||||:.:::.||....:|:|
Zfish   146 VPSLCGTDHTERRGRIQITAEIKNNVLTVSIKEAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQK 210

  Fly   247 TKTIQKNLNPVFNETFTFELQPQDRDKRLLIEVWDWDRTSRNDFMGSFSFSLEELQKEPVDGWYK 311
            ||||:..|||.:||||||.|:..|:|:||.:|:||||.|||||||||.||.:.||||:.||||:|
Zfish   211 TKTIKCCLNPTWNETFTFNLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKQGVDGWFK 275

  Fly   312 FLSQVEGEHYNIPCV---DAFNDIARLRDEVRHDRRP--------NEKRRMDNKDMPHNMSKRDM 365
            .|||.|||::|:|..   :..|:..|.:.| |....|        |...:.|:.      ..||.
Zfish   276 LLSQEEGEYFNVPVPPEGEEGNEELRQKFE-RAKIGPSKTDGSSSNAISKFDSN------GNRDR 333

  Fly   366 IRAADFNFVKVIGKGSFGKVLLAERRGTDELYAVKVLRKDVIIQTDDMELPMNEKKILALSGRPP 430
            ::.:||||:.|:||||||||:||||:|.|||:|:|:|:|||:||.||:|..|.||::|||||:||
Zfish   334 MKLSDFNFLMVLGKGSFGKVMLAERKGADELFAIKILKKDVVIQDDDVECTMVEKRVLALSGKPP 398

  Fly   431 FLVSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFLHERDIIYRD 495
            ||..:||||||||||:|||||..|||||||:||.|:|||..|:|||.|:||.|||||.:.:||||
Zfish   399 FLTQLHSCFQTMDRLYFVMEYINGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGVIYRD 463

  Fly   496 LKLDNILLDGEGHVKLVDFGLSKEGVTERQTTRTFCGTPNYMAPEIVSYDPYSIAADWWSFGVLL 560
            |||||::||.|||:|:.|||:.||.:.:..||:||||||:|:||||::|.||..:.|||:|||||
Zfish   464 LKLDNVMLDAEGHIKIADFGMCKENMLDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 528

  Fly   561 FEFMAGQAPFEGDDETTVFRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLGAGRYARQEITT 625
            :|.:|||.||:|:||..:|::|.:....:||..|.||:.|....:||.|..|||.|....::|..
Zfish   529 YEMLAGQPPFDGEDEDELFQSIMEHHVSYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIRE 593

  Fly   626 HPFFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDDAFTKEKTDLTPTDKLFMMNLDQNDFIGFS 690
            |.|||.:||:|.|..|::||.||....| |..|||..||:....|||.|:..:|||||::|.|||
Zfish   594 HGFFRYMDWEKLEHREVQPPFKPKACGR-DAENFDRFFTRHPPVLTPPDQEVIMNLDQDEFEGFS 657

  Fly   691 FMNPEF 696
            |:||||
Zfish   658 FINPEF 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_cPKC_nPKC_rpt1 71..123 CDD:410342 32/51 (63%)
C1 137..190 CDD:412127 25/52 (48%)
C2_PKC_alpha_gamma 194..324 CDD:175992 76/129 (59%)
STKc_PKC 375..692 CDD:270722 182/316 (58%)
prkcbbNP_957272.1 C1_cPKC_rpt1 34..91 CDD:410383 35/56 (63%)
C1_cPKC_rpt2 101..154 CDD:410386 25/52 (48%)
C2_PKC_alpha_gamma 158..288 CDD:175992 76/129 (59%)
STKc_cPKC_beta 338..660 CDD:270767 187/322 (58%)

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