DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaC and Pdk1

DIOPT Version :9

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001261183.1 Gene:Pdk1 / 38017 FlyBaseID:FBgn0020386 Length:836 Species:Drosophila melanogaster


Alignment Length:641 Identity:137/641 - (21%)
Similarity:235/641 - (36%) Gaps:191/641 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 TFCDECGLLLHGVAHQGVKCENCNLN-VHH-------------ACQETVPPMCGADISEVRGKLL 198
            |...:||             |||:.| ..|             |.:.|:|.|       .:.|..
  Fly    47 TVASDCG-------------ENCSSNGTEHQQHFNIATTTATSATEATMPAM-------AKEKAS 91

  Fly   199 LYVELKGNNLK-VDIKEAANLIPMD--------------------------------TNGFSDPY 230
            ..|.|..:|.: :::|:.|.::...                                |||.:.|.
  Fly    92 ATVSLGESNFRDINLKDLAVVVEAASRLHHQQNVCGCGAVSSTENNNNSRYGSSKYLTNGHTSPL 156

  Fly   231 IAVQMHPDRSGRTKKKTKTIQKNLNPVFNETFTFELQPQDRDKRLLIEVWDWDRTSRNDFMGSFS 295
            .|.......|..|....:.:.           ...||....|.|...|:.|..|.....     .
  Fly   157 AAAVASNSSSVATTPHCRMLH-----------NCSLQQYQNDIRQQTEILDMLRQQHQQ-----G 205

  Fly   296 FSLEELQKEPVDGWYKFLSQVEGEHYNIPCVDAFNDIARLRDEVRHDRRPNEKRRMDNKDMPHNM 360
            :..::.|::|                                :.:.:::..:::....:.:.:..
  Fly   206 YQSQQQQQQP--------------------------------QQQQEQQQQQEQSQQQQQLQNPA 238

  Fly   361 SKRDMIRAADFNFVKVIGKGSFGKVLLAERRGTDELYAVKVLRKDVIIQTDDMELPMNEKKILAL 425
            .:|.   ..||.|.:.||:||:..|.||....:...||:||..|.:|::....:....|::::..
  Fly   239 PRRS---PNDFIFGRYIGEGSYSIVYLAVDIHSRREYAIKVCEKRLILRERKQDYIKREREVMHQ 300

  Fly   426 SGRPPFLVSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFLHERD 490
            ....|..|::...||....|:|||.|.:.||::.::.:.|.|..:....||.|:.:|...:|.|:
  Fly   301 MTNVPGFVNLSCTFQDQRSLYFVMTYARKGDMLPYINRVGSFDVACTRHYAAELLLACEHMHRRN 365

  Fly   491 IIYRDLKLDNILLDGEGHVKLVDFGLSK------------------------------------- 518
            :::||||.:|||||.:.|..:.|||.:|                                     
  Fly   366 VVHRDLKPENILLDEDMHTLIADFGSAKVMTAHERALATEHCSEQRRSNSDEDDEDSDRLENEDE 430

  Fly   519 -----------EGVTERQTTR-----------------TFCGTPNYMAPEIVSYDPYSIAADWWS 555
                       :|..|:|...                 :|.||..|::||::...|.:.|||.|:
  Fly   431 DFYDRDSEELDDGDDEQQQEEMDSPRHRQRRYNRHRKASFVGTAQYVSPEVLQNGPITPAADLWA 495

  Fly   556 FGVLLFEFMAGQAPFEGDDETTVFRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLGA----G 616
            .|.::::.:||..||.|.::..:|:.|.|....||:.|..:|.|::...|...|.:||||    |
  Fly   496 LGCIVYQMIAGLPPFRGSNDYVIFKEILDCAVDFPQGFDKDAEDLVRKLLRVDPRDRLGAQDEFG 560

  Fly   617 RYARQEITTHPFFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDDAFTKEKTDLTP 672
            .|  :.|..||||..:||..... :..|||.|.:.......:|..::| ...||.|
  Fly   561 YY--ESIRAHPFFAGIDWQTLRQ-QTPPPIYPYLPGVSQDEDFRSSYT-VPGDLEP 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_1 72..124 CDD:278556
C1_1 137..189 CDD:278556 12/54 (22%)
C2_PKC_alpha_gamma 194..324 CDD:175992 22/162 (14%)
S_TKc 371..629 CDD:214567 88/326 (27%)
STKc_PKC 375..692 CDD:270722 99/367 (27%)
Pdk1NP_001261183.1 STKc_PDK1 244..571 CDD:270733 89/328 (27%)
S_TKc 246..571 CDD:214567 88/326 (27%)
PH_PDK1 658..764 CDD:241293
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24356
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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