DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaC and Rps6ka4

DIOPT Version :10

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001101987.2 Gene:Rps6ka4 / 361715 RGDID:1307277 Length:773 Species:Rattus norvegicus


Alignment Length:344 Identity:137/344 - (39%)
Similarity:196/344 - (56%) Gaps:12/344 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 DMIRAADFNFVKVIGKGSFGKVLLAERRG---TDELYAVKVLRKDVIIQ-TDDMELPMNEKKILA 424
            :.:...:|..:||:|.|::|||.|..:.|   ..:|||:|||||..::| ....|....|:.:|.
  Rat    26 EKVSVENFALLKVLGTGAYGKVFLVRKAGGHDAGKLYAMKVLRKAALVQRAKTQEHTRTERSVLE 90

  Fly   425 LSGRPPFLVSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFLHER 489
            |..:.||||::|..|||..:|..:::|..||::..|:.|...|||:....|..|:.:||..||:.
  Rat    91 LVRQAPFLVTLHYAFQTDAKLHLILDYVSGGEMFTHLYQRQYFKEAEVRVYGGEIVLALEHLHKL 155

  Fly   490 DIIYRDLKLDNILLDGEGHVKLVDFGLSKEGVT-ERQTTRTFCGTPNYMAPEIV-SYDPYSIAAD 552
            .||||||||:|:|||.|||:.|.|||||||.:| |::.|.:||||..||||||: |...:..|.|
  Rat   156 GIIYRDLKLENVLLDSEGHIVLTDFGLSKEFLTEEKERTFSFCGTIEYMAPEIIRSKAGHGKAVD 220

  Fly   553 WWSFGVLLFEFMAGQAPF--EGDDET--TVFRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRL 613
            |||.|:||||.:.|.:||  ||:..|  .|.|.|......||......|.|::...|.|.|..||
  Rat   221 WWSLGILLFELLTGASPFTLEGERNTQAEVSRRILKCSPPFPPRIGPVAQDLLQRLLCKDPKKRL 285

  Fly   614 GAGRYARQEITTHPFFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDDAFTKEKTDLTPTDKLFM 678
            |||....||:.:|.||:.:||....|.::..|.:|.|:...|:.||.:.||:.:...:|...  .
  Rat   286 GAGPQGAQEVKSHLFFQGLDWVALAARKIPAPFRPQIRSELDVGNFAEEFTRLEPVYSPAGS--P 348

  Fly   679 MNLDQNDFIGFSFMNPEFI 697
            ...|...|.|:||:.|..:
  Rat   349 PPGDPRIFQGYSFVAPSIL 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_cPKC_nPKC_rpt1 71..123 CDD:410342
C1 137..190 CDD:412127
C2_PKC_alpha_gamma 194..324 CDD:175992
STKc_PKC 375..692 CDD:270722 134/326 (41%)
Rps6ka4NP_001101987.2 STKc_MSK2_N 32..364 CDD:270765 136/333 (41%)
Protein Kinases, catalytic domain 404..714 CDD:473864
Blue background indicates that the domain is not in the aligned region.

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