DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inaC and Pka-C1

DIOPT Version :10

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_476977.1 Gene:Pka-C1 / 34284 FlyBaseID:FBgn0000273 Length:353 Species:Drosophila melanogaster


Alignment Length:350 Identity:119/350 - (34%)
Similarity:191/350 - (54%) Gaps:16/350 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   326 VDAFNDIARLRDEVRHDRRPNEKRRMDNKDMPHNMSKRDMIRAADFNFVKVIGKGSFGKVLLAER 390
            |||...:....::.:.:.....:|.      |.|.:..|     ||..:|.:|.||||:|::.:.
  Fly    12 VDAAETVKEFLEQAKEEFEDKWRRN------PTNTAALD-----DFERIKTLGTGSFGRVMIVQH 65

  Fly   391 RGTDELYAVKVLRKDVIIQTDDMELPMNEKKILALSGRPPFLVSMHSCFQTMDRLFFVMEYCKGG 455
            :.|.:.||:|:|.|..:::...:|..:|||:||. :.:.|||||:...|:....|:.|:||..||
  Fly    66 KPTKDYYAMKILDKQKVVKLKQVEHTLNEKRILQ-AIQFPFLVSLRYHFKDNSNLYMVLEYVPGG 129

  Fly   456 DLMYHMQQYGRFKESVAIFYAVEVAIALFFLHERDIIYRDLKLDNILLDGEGHVKLVDFGLSKEG 520
            ::..|:::.|||.|..:.|||.::.:|..:||..|:||||||.:|:|:|.:|::|:.|||.:|. 
  Fly   130 EMFSHLRKVGRFSEPHSRFYAAQIVLAFEYLHYLDLIYRDLKPENLLIDSQGYLKVTDFGFAKR- 193

  Fly   521 VTERQTTRTFCGTPNYMAPEIVSYDPYSIAADWWSFGVLLFEFMAGQAPFEGDDETTVFRNIKDK 585
              .:..|.|.||||.|:||||:....|:.|.|||:.|||::|..||..||..|....::..|...
  Fly   194 --VKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLVYEMAAGYPPFFADQPIQIYEKIVSG 256

  Fly   586 KAVFPKHFSVEAMDIITSFLTKKPNNRLGAGRYARQEITTHPFFRNVDWDKAEACEMEPPIKPMI 650
            |..||.||..:..|::.:.|......|.|..:....:|....:|.:.||......::|.|..|..
  Fly   257 KVRFPSHFGSDLKDLLRNLLQVDLTKRYGNLKAGVNDIKNQKWFASTDWIAIFQKKIEAPFIPRC 321

  Fly   651 KHRKDISNFDDAFTKEKTDLTPTDK 675
            |...|.||||| :.:|...::.|:|
  Fly   322 KGPGDTSNFDD-YEEEALRISSTEK 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_cPKC_nPKC_rpt1 71..123 CDD:410342
C1 137..190 CDD:412127
C2_PKC_alpha_gamma 194..324 CDD:175992
STKc_PKC 375..692 CDD:270722 109/300 (36%)
Pka-C1NP_476977.1 STKc_PKA 44..333 CDD:271111 110/298 (37%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.