DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaC and Rps6ka5

DIOPT Version :10

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001382521.1 Gene:Rps6ka5 / 314384 RGDID:1308336 Length:798 Species:Rattus norvegicus


Alignment Length:348 Identity:134/348 - (38%)
Similarity:194/348 - (55%) Gaps:32/348 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   370 DFNFVKVIGKGSFGKVLLAER-RGTD--ELYAVKVLRKDVIIQ-TDDMELPMNEKKILALSGRPP 430
            :|..:||:|.|::|||.|..: .|.|  :|||:|||:|..|:| ....|....|:::|....:.|
  Rat    47 NFELLKVLGTGAYGKVFLVRKISGHDAGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 111

  Fly   431 FLVSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFLHERDIIYRD 495
            |||::|..|||..:|..:::|..||:|..|:.|..||.|.....|..|:.:||..||:..|||||
  Rat   112 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRD 176

  Fly   496 LKLDNILLDGEGHVKLVDFGLSKEGVT-ERQTTRTFCGTPNYMAPEIV-----SYDPYSIAADWW 554
            :||:|||||..|||.|.|||||||.|. |.:...:||||..||||:||     .:|.   |.|||
  Rat   177 IKLENILLDSNGHVVLTDFGLSKEFVADEAERAYSFCGTIEYMAPDIVRGGDSGHDK---AVDWW 238

  Fly   555 SFGVLLFEFMAGQAPF----EGDDETTVFRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLGA 615
            |.|||::|.:.|.:||    |.:.:..:.|.|...:..:|:..|..|.|::...|.|.|..|||.
  Rat   239 SLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQGMSSVAKDLLQRLLMKDPKKRLGC 303

  Fly   616 GRYARQEITTHPFFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDDAFTKEKTDLTP------TD 674
            |....:||..|.||..::||...|.::..|.||:|:...|:|||.:.||:.....:|      ::
  Rat   304 GPRDAEEIKEHLFFEKINWDDLAAKKVPAPFKPVIRDELDVSNFAEEFTEMDPTYSPAALPQSSE 368

  Fly   675 KLFMMNLDQNDFIGFSFMNPEFI 697
            :||.         |:||:.|..:
  Rat   369 RLFQ---------GYSFVAPSIL 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_cPKC_nPKC_rpt1 71..123 CDD:410342
C1 137..190 CDD:412127
C2_PKC_alpha_gamma 194..324 CDD:175992
STKc_PKC 375..692 CDD:270722 131/336 (39%)
Rps6ka5NP_001382521.1 Protein Kinases, catalytic domain 47..379 CDD:473864 133/343 (39%)
STKc_MSK1_C 417..726 CDD:271081
Blue background indicates that the domain is not in the aligned region.

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