DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inaC and Prkce

DIOPT Version :9

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_058867.2 Gene:Prkce / 29340 RGDID:61925 Length:737 Species:Rattus norvegicus


Alignment Length:671 Identity:251/671 - (37%)
Similarity:361/671 - (53%) Gaps:110/671 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 MKNRLRKGAMKRKGLEMVNGHRFGVRFFKNPTYCGHCKDFIWG-FGKQGFQCEECRFNIHQKCCK 115
            |:.|.|:||::|: :..||||:|...:.:.||||.||:||||| .||||:||:.|...:|::|.:
  Rat   151 MRPRKRQGAVRRR-VHQVNGHKFMATYLRQPTYCSHCRDFIWGVIGKQGYQCQVCTCVVHKRCHE 214

  Fly   116 FVVFKCPGKDTDFDAD-------CAKVKHGWISTTYTTPTFCDECGLLLHGVAHQGVKCENCNLN 173
            .::.||.|.......|       ...:.|.:....|..|||||.||.||.|:..||::|:.|.:|
  Rat   215 LIITKCAGLKKQETPDEVGSQRFSVNMPHKFGIHNYKVPTFCDHCGSLLWGLLRQGLQCKVCKMN 279

  Fly   174 VHHACQETVPPMCGADISEVRGKLLLYVELKGNNLKVDIKEAANLIPMDTNGFSDPYIAVQMHPD 238
            ||..|:..|.|.||                                 :|..|.:.....:.:.||
  Rat   280 VHRRCETNVAPNCG---------------------------------VDARGIAKVLADLGVTPD 311

  Fly   239 R---SGRTKKKTKTIQKNLNPVFNETFTFELQPQDRDKRLLIEVWDWDRTSRNDFMGSFSFSLEE 300
            :   ||:.:||.....::..|....:      |.:.|:.                          
  Rat   312 KITNSGQRRKKLAAGAESPQPASGNS------PSEDDRS-------------------------- 344

  Fly   301 LQKEPVDGWYKFLSQVEGEHYNIPCVDAFNDIA-RLRDEVRHDRRPNEKRRM-----------DN 353
             :..|..                ||.....::. .:|..:..|.|..|.|..           :|
  Rat   345 -KSAPTS----------------PCDQELKELENNIRKALSFDNRGEEHRASSSTDGQLASPGEN 392

  Fly   354 KDMPHNMSKRDMIRAADFNFVKVIGKGSFGKVLLAERRGTDELYAVKVLRKDVIIQTDDMELPMN 418
            .::....:||  :...:|||:||:||||||||:|||.:|.||:||||||:||||:|.||::..|.
  Rat   393 GEVRQGQAKR--LGLDEFNFIKVLGKGSFGKVMLAELKGKDEVYAVKVLKKDVILQDDDVDCTMT 455

  Fly   419 EKKILALSGRPPFLVSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIAL 483
            ||:||||:.:.|:|..::.||||.|||||||||..|||||:.:|:..:|.|..:.|||.||..||
  Rat   456 EKRILALARKHPYLTQLYCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTSAL 520

  Fly   484 FFLHERDIIYRDLKLDNILLDGEGHVKLVDFGLSKEGVTERQTTRTFCGTPNYMAPEIVSYDPYS 548
            .|||:..:|||||||||||||.|||.||.|||:.|||:....||.||||||:|:||||:....|.
  Rat   521 MFLHQHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYG 585

  Fly   549 IAADWWSFGVLLFEFMAGQAPFEGDDETTVFRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRL 613
            .:.|||:.|||::|.||||.|||.|:|..:|.:|.....::|...|.||:.|:.:|:||.|:.||
  Rat   586 PSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTKNPHKRL 650

  Fly   614 G--AGRYARQEITTHPFFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDDAFTKEKTDLTPTDKL 676
            |  |.:.....|..||||:.:||...|..:::||.||.||.::|::|||..||:|:..||..|:.
  Rat   651 GCVAAQNGEDAIKQHPFFKEIDWVLLEQKKIKPPFKPRIKTKRDVNNFDQDFTREEPILTLVDEA 715

  Fly   677 FMMNLDQNDFIGFSFMNPEFI 697
            .:..::|.:|.|||:...:.:
  Rat   716 IVKQINQEEFKGFSYFGEDLM 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_1 72..124 CDD:278556 24/52 (46%)
C1_1 137..189 CDD:278556 24/51 (47%)
C2_PKC_alpha_gamma 194..324 CDD:175992 12/132 (9%)
S_TKc 371..629 CDD:214567 144/259 (56%)
STKc_PKC 375..692 CDD:270722 167/318 (53%)
PrkceNP_058867.2 C2_PKC_epsilon 3..135 CDD:175981
C1_nPKC_epsilon-like_rpt1 161..224 CDD:410385 29/63 (46%)
Interaction with actin. /evidence=ECO:0000250 223..228 0/4 (0%)
C1_nPKC_epsilon-like_rpt2 241..295 CDD:410388 24/86 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 310..356 12/94 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 369..398 5/28 (18%)
STKc_nPKC_epsilon 412..732 CDD:270743 167/319 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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