DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaC and pck2

DIOPT Version :10

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_595950.1 Gene:pck2 / 2539649 PomBaseID:SPBC12D12.04C Length:1016 Species:Schizosaccharomyces pombe


Alignment Length:723 Identity:230/723 - (31%)
Similarity:349/723 - (48%) Gaps:115/723 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 PSAAPGAKAPAAGAGKGPGNLLEITGEANI-VNYMKNRLRKGAM------------KRKGLEMVN 70
            |:.|.|.::.:|...      ||..|:.|: :|:.|:..||..|            :::.:..|.
pombe   346 PNTASGNQSVSAWFS------LEPMGQINLTMNFTKHNTRKRPMDAGLGRQGAIRQRKESVHEVY 404

  Fly    71 GHRFGVRFFKNPTYCGHCKDFIWGFGKQGFQCEECRFNIHQKCCKFVVFKCPGKDTD-----FDA 130
            ||:|....|.....|..|.:|:  ....|.||.:|.:..|:||...||.||..|.:|     ::.
pombe   405 GHKFLQHQFYQIMRCALCGEFL--KNAAGMQCIDCHYTCHKKCYPKVVTKCISKSSDSASSEYEK 467

  Fly   131 DCAKVKHGWISTTYTTPTFCDECGLLLHGVAHQGVKCENCNLNVHHACQETVPPMCGAD------ 189
            ...::.|.:.|.|.....:|..||.:|........||..|.:..|..|...||..||..      
pombe   468 INHRIPHHFESHTNIGANWCCHCGYILPLGRKTARKCTECGITAHAQCVHLVPDFCGMSMEMANR 532

  Fly   190 -ISEVRGKLLLYVELKGNNLKVDIKEAANLIPMDTNGFSDPYIAVQMHPDRSGRTK----KKTKT 249
             |||:|                                :......|.|..:|...|    ||:|:
pombe   533 VISEIR--------------------------------TTKIYKAQQHKQKSSHHKHHHHKKSKS 565

  Fly   250 IQK------NLNPVFNETFTFELQPQD----RDKRLLIE--------VWDWDRTSRND-FMGSFS 295
            ...      ..:.....|.|..:.|.|    ..|.|.||        ..:.:.||.:| .:|:..
pombe   566 SSSKHKENDKASVSITTTTTPSITPADPVPTSPKPLAIEPVKRKPVHAGNLEVTSVSDNKLGATV 630

  Fly   296 FSLEELQKEPVDGWYKFLSQVEGEHYNIPCVDAFNDIARLRDEVRHDRRPNEKRRMDNKDMPHNM 360
            ..:|:...:..|...|           .|.:||..:...:         |:.:..:..:|:.|  
pombe   631 QVVEQKVDDKADALTK-----------PPSLDAVKEPIPV---------PSVETSVVAQDLTH-- 673

  Fly   361 SKRDMIRAADFNFVKVIGKGSFGKVLLAERRGTDELYAVKVLRKDVIIQTDDMELPMNEKKILAL 425
             |...|...||.|:.|:|||:||||:|||.:...:|||:|||:|:.|::.|::|...:||::..:
pombe   674 -KAKRIGLEDFTFLSVLGKGNFGKVMLAELKSEKQLYAIKVLKKEFILENDEVESTKSEKRVFLV 737

  Fly   426 SGRP--PFLVSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFLHE 488
            :.|.  ||||::||||||..|::|||::..|||||.|:|| .:|....|.|||.||.:||.:.|:
pombe   738 ANRERHPFLVNLHSCFQTETRIYFVMDFVSGGDLMLHIQQ-EQFSRRRAQFYAAEVCLALKYFHD 801

  Fly   489 RDIIYRDLKLDNILLDGEGHVKLVDFGLSKEGVTERQTTRTFCGTPNYMAPEIVSYDPYSIAADW 553
            ..|||||||||||||..:||||:.|:||.||.:....||.||||||.:|||||:....|:.:.||
pombe   802 NGIIYRDLKLDNILLSPDGHVKVADYGLCKEDMWHDNTTATFCGTPEFMAPEILLEQQYTRSVDW 866

  Fly   554 WSFGVLLFEFMAGQAPFEGDDETTVFRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLGAGRY 618
            |:||||:::.:.||:||.|:||..:|..|...:.::|.|...:::.|:...||:.|..|||:|..
pombe   867 WAFGVLIYQMLLGQSPFRGEDEEEIFDAILSDEPLYPIHMPRDSVSILQQLLTRDPKKRLGSGPN 931

  Fly   619 ARQEITTHPFFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDDAFTKEKTDLTPTDKLFMMNLDQ 683
            ..:::.|||||.|::||.......:||..|.:....|...||:.||:|...|||.:.:....:.|
pombe   932 DAEDVMTHPFFSNINWDDIYHKRTQPPYIPSLNSPTDTKYFDEEFTRELPVLTPVNSILTKEMQQ 996

  Fly   684 NDFIGFSF 691
            : |.|||:
pombe   997 H-FEGFSY 1003

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_cPKC_nPKC_rpt1 71..123 CDD:410342 18/51 (35%)
C1 137..190 CDD:412127 16/59 (27%)
C2_PKC_alpha_gamma 194..324 CDD:175992 23/152 (15%)
STKc_PKC 375..692 CDD:270722 143/319 (45%)
pck2NP_595950.1 HR1_PKC-like_1_fungi 2..73 CDD:212011
HR1_PKC-like_2_fungi 115..186 CDD:212010
C2_fungal_Pkc1p 213..320 CDD:176071
C1_ScPKC1-like_rpt1 404..454 CDD:410372 17/51 (33%)
C1_ScPKC1-like_rpt2 470..528 CDD:410373 16/57 (28%)
STKc_PKC 688..1003 CDD:270722 142/316 (45%)
Blue background indicates that the domain is not in the aligned region.

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