DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inaC and Rskr

DIOPT Version :10

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001391729.1 Gene:Rskr / 216976 MGIID:2652869 Length:406 Species:Mus musculus


Alignment Length:317 Identity:103/317 - (32%)
Similarity:156/317 - (49%) Gaps:29/317 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   374 VKVIG---KGSFGKVLLAERRGTDELYAVKVLRKDVIIQTDDMELPMNEKKILALSGRPPFLVSM 435
            :|::|   |||||.||.........::||||:.|..::|.|.:.....|..|...... ||:.|:
Mouse   101 LKILGLVAKGSFGTVLKVLDCAQKAVFAVKVVPKVKVLQRDTLRQCKEEVSIQRQINH-PFVHSL 164

  Fly   436 HSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFLHERDIIYRDLKLDN 500
            ...:|....||.:..|| ..||.......|.|.|.....:|.|:.:.|.:||:..||:||:|::|
Mouse   165 GDSWQGKQHLFIMCSYC-SMDLYSLWSTVGWFPEDSIRLFAAELVLVLCYLHDLGIIHRDVKMEN 228

  Fly   501 ILLDGEGHVKLVDFGLSKEGVTERQTTRTFCGTPNYMAPEIVSYDPYSIAADWWSFGVLLFEFMA 565
            ||||..||:|:.|||||:. :::.....|.|||..|||||::|..||:..|||||.|||||....
Mouse   229 ILLDERGHLKVTDFGLSRH-LSQGARAYTICGTLQYMAPEVLSGGPYNHTADWWSLGVLLFSLAT 292

  Fly   566 GQAPFEGD-DETTVFRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLGAGRYARQEITTHPFF 629
            |:.|...: |...:..::...::..|...:.|...::...|.:.|.:||   ||. .....||||
Mouse   293 GKFPVAAERDHVAMLASVAHCESEIPASINQELSLLLHELLCQNPLHRL---RYL-HHFQVHPFF 353

  Fly   630 RNVDWDKAEACEMEPPIKPMIKHRKDISNFDDAFTKEKTDLTPTDKLFMMNLDQNDF 686
            |.|.:|            |.:..::.::     |..||.|..|: .|..|:.:..|:
Mouse   354 RGVAFD------------PELLQKQPVN-----FVMEKQDTWPS-PLESMSFEDFDY 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_cPKC_nPKC_rpt1 71..123 CDD:410342
C1 137..190 CDD:412127
C2_PKC_alpha_gamma 194..324 CDD:175992
STKc_PKC 375..692 CDD:270722 103/316 (33%)
RskrNP_001391729.1 Protein Kinases, catalytic domain 109..353 CDD:473864 87/250 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.